fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012952 not found in 163aa AT2G40435.1 1st_not 0.454248366 II
Sb021553 not found in 287aa AT2G40435.1 1st_not 0.428104575 II
Gm031914 not found in 157aa AT2G40435.1 1st_not 0.555555555 II
Gm031526 not found in 184aa AT3G56220.1 not_1st 0.421568627 II
Gm048769 not found in 148aa AT3G56220.1 not_1st 0.415032679 II
Pt014837 not found in 156aa AT2G40435.1 1st_not 0.437908496 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G56220.1     ------------------------------------------------------------
gm031526_Glyma1 -----------------------MAKD-----FF------------------AQSSPCER
Sb021553_Sorbi1 ERLVGEKDDVVKGAQEAGGCSSGEAEDPPLHHSFPRFEQHIDNHGRVGVHQGAEAEGGEA
pt014837_POPTR_ ------------------------------------------------------------
gm031914_Glyma1 ------------------------------------------------------------
gm048769_Glyma1 ------------------------------------------------------------
Os012952_Os03t0 ------------------------------------------------------------
                                                                            

AT3G56220.1     ----------------MVS---REHKRGSSLREKFHLLR------------SITDSHAES
gm031526_Glyma1 ESVINLRER-----ENMVS---RVHKR-IAMYRNLQLLR------------SIRYSNSRL
Sb021553_Sorbi1 EPGDCLRARCAETQVVVLSDGDRGNPRSAGVVPRQRVLRQELPGAARLRPGSLRRARAQR
pt014837_POPTR_ ----------------MVS---REQKR-AAKQKKLQLLR------------SITNSHAHD
gm031914_Glyma1 ----------------MVS---REQKR-AALHEKLQLLR------------SITNSHALN
gm048769_Glyma1 ----------------MVS---RVHKR-TAMYRNLHLLR------------SIRYSHS--
Os012952_Os03t0 ---------------MMSS---RERKKAAALQEKLQILR------------SITHSHALS
                                : *   * . :  .   . ::**            *:  :.:  

AT3G56220.1     ETSIIVDASKYIKKL---------------------------KQKVEKINN----ATTSE
gm031526_Glyma1 KASVLLELSDYIQGL---------------------------KQKLEELNQL--LTVATA
Sb021553_Sorbi1 PP-----GHRLLRRLLPPRGCGRRERGGQRGRARREAGRPAGRQELLRERQRAGRGVSRG
pt014837_POPTR_ KASIILDASNYIKDL---------------------------KQRVEKLNQ----DVATA
gm031914_Glyma1 KTSIIIDASKYIEEL---------------------------KQKVERLNQ----HVANA
gm048769_Glyma1 -------VSDYIQGL---------------------------KQKLEELNQ---LTVATA
Os012952_Os03t0 NTSILMDASKYIKEL---------------------------KQKVVRLNQ----EIACA
                           :. *                           :*.: . .:      :  

AT3G56220.1     QSFRESSDPN--PMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCT
gm031526_Glyma1 RKI---ADYDPMPKLEVETQEEAFVIKVLSESSCQGLLVFILEAFEEMGLDVLQARVSCA
Sb021553_Sorbi1 Q-----ADER------VSTHQASTCIGRTS--SCPGPYVVVLR-IHELSRDPLYASSSVP
pt014837_POPTR_ ASF---TSQN-FPTIRVEEQENDFLIKVFTARNCQGLLVFILEAFEELGLEVLQARVSTS
gm031914_Glyma1 QTS---SDQNTLPMVTVETLEKGFLINVYSAKTCPGLLVSILESFEEIGLNVLEARVTCT
gm048769_Glyma1 RKI---VDYDPMPKVEVETQEEGFVIKVLSESSCQGLLVFILEAFEELGLDVLQARVSCA
Os012952_Os03t0 QDA---LRQN---RVTVETLRHGFLVNVFSGKSCPGLLVSILEAFDELGLSVLEATASCT
                                *.  .    :   :  .  *  * :*. :.::. . : *  : .

AT3G56220.1     DTFSLHAIG-SSNNDDG-DCIDAEAVKQAVAEAIRTWSDSHA------------
gm031526_Glyma1 DSFSLEAIGNNKENNEDTHTLDAQLVEQVVSQAIQNWWEVSQI-----------
Sb021553_Sorbi1 SL----------------------------------------------------
pt014837_POPTR_ DSFHLEAIA-TRENKEAEDHIDTQVVKQVVLQGIQKWIEVSEQE----------
gm031914_Glyma1 DTFRFHAVG-GKNEEQGDEGIDAQTVKQELGQAIKNWSQNADQK----------
gm048769_Glyma1 HSFSLEALG-NKENNEDTRPLDAQLVEQVVSQAIQNWREVSQI-----------
Os012952_Os03t0 DTFRLEAIG-SENLMEK---VDEHVVKQAVLRAIRSCSGSGGDHHDDDDDDDDE
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm031526_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - M A K D - - - - - F F - - - - - - - - - - - - - - - - - - A Q S S P C E R
Sb021553_Sorbi1    E R L V G E K D D V V K G A Q E A G G C S S G E A E D P P L H H S F P R F E Q H I D N H G R V G V H Q G A E A E G G E A
pt014837_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm031914_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm048769_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os012952_Os03t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G56220.1     - - - - - - - - - - - - - - - - M V S - - - R E H K R G S S L R E K F H L L R - - - - - - - - - - - - S I T D S H A E S
gm031526_Glyma1    E S V I N L R E R - - - - - E N M V S - - - R V H K R - I A M Y R N L Q L L R - - - - - - - - - - - - S I R Y S N S R L
Sb021553_Sorbi1    E P G D C L R A R C A E T Q V V V L S D G D R G N P R S A G V V P R Q R V L R Q E L P G A A R L R P G S L R R A R A Q R
pt014837_POPTR_    - - - - - - - - - - - - - - - - M V S - - - R E Q K R - A A K Q K K L Q L L R - - - - - - - - - - - - S I T N S H A H D
gm031914_Glyma1    - - - - - - - - - - - - - - - - M V S - - - R E Q K R - A A L H E K L Q L L R - - - - - - - - - - - - S I T N S H A L N
gm048769_Glyma1    - - - - - - - - - - - - - - - - M V S - - - R V H K R - T A M Y R N L H L L R - - - - - - - - - - - - S I R Y S H S - -
Os012952_Os03t0    - - - - - - - - - - - - - - - M M S S - - - R E R K K A A A L Q E K L Q I L R - - - - - - - - - - - - S I T H S H A L S
 
AT3G56220.1     E T S I I V D A S K Y I K K L - - - - - - - - - - - - - - - - - - - - - - - - - - - K Q K V E K I N N - - - - A T T S E
gm031526_Glyma1    K A S V L L E L S D Y I Q G L - - - - - - - - - - - - - - - - - - - - - - - - - - - K Q K L E E L N Q L - - L T V A T A
Sb021553_Sorbi1    P P - - - - - G H R L L R R L L P P R G C G R R E R G G Q R G R A R R E A G R P A G R Q E L L R E R Q R A G R G V S R G
pt014837_POPTR_    K A S I I L D A S N Y I K D L - - - - - - - - - - - - - - - - - - - - - - - - - - - K Q R V E K L N Q - - - - D V A T A
gm031914_Glyma1    K T S I I I D A S K Y I E E L - - - - - - - - - - - - - - - - - - - - - - - - - - - K Q K V E R L N Q - - - - H V A N A
gm048769_Glyma1    - - - - - - - V S D Y I Q G L - - - - - - - - - - - - - - - - - - - - - - - - - - - K Q K L E E L N Q - - - L T V A T A
Os012952_Os03t0    N T S I L M D A S K Y I K E L - - - - - - - - - - - - - - - - - - - - - - - - - - - K Q K V V R L N Q - - - - E I A C A
 
AT3G56220.1     Q S F R E S S D P N - - P M V T V E T L E K G F M I K V M S R K N E A G M L V C V L E T F E D L G L D V V E A R V S C T
gm031526_Glyma1    R K I - - - A D Y D P M P K L E V E T Q E E A F V I K V L S E S S C Q G L L V F I L E A F E E M G L D V L Q A R V S C A
Sb021553_Sorbi1    Q - - - - - A D E R - - - - - - V S T H Q A S T C I G R T S - - S C P G P Y V V V L R - I H E L S R D P L Y A S S S V P
pt014837_POPTR_    A S F - - - T S Q N - F P T I R V E E Q E N D F L I K V F T A R N C Q G L L V F I L E A F E E L G L E V L Q A R V S T S
gm031914_Glyma1    Q T S - - - S D Q N T L P M V T V E T L E K G F L I N V Y S A K T C P G L L V S I L E S F E E I G L N V L E A R V T C T
gm048769_Glyma1    R K I - - - V D Y D P M P K V E V E T Q E E G F V I K V L S E S S C Q G L L V F I L E A F E E L G L D V L Q A R V S C A
Os012952_Os03t0    Q D A - - - L R Q N - - - R V T V E T L R H G F L V N V F S G K S C P G L L V S I L E A F D E L G L S V L E A T A S C T
 
AT3G56220.1     D T F S L H A I G - S S N N D D G - D C I D A E A V K Q A V A E A I R T W S D S H A - - - - - - - - - - - -
gm031526_Glyma1    D S F S L E A I G N N K E N N E D T H T L D A Q L V E Q V V S Q A I Q N W W E V S Q I - - - - - - - - - - -
Sb021553_Sorbi1    S L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt014837_POPTR_    D S F H L E A I A - T R E N K E A E D H I D T Q V V K Q V V L Q G I Q K W I E V S E Q E - - - - - - - - - -
gm031914_Glyma1    D T F R F H A V G - G K N E E Q G D E G I D A Q T V K Q E L G Q A I K N W S Q N A D Q K - - - - - - - - - -
gm048769_Glyma1    H S F S L E A L G - N K E N N E D T R P L D A Q L V E Q V V S Q A I Q N W R E V S Q I - - - - - - - - - - -
Os012952_Os03t0    D T F R L E A I G - S E N L M E K - - - V D E H V V K Q A V L R A I R S C S G S G G D H H D D D D D D D D E
 
0