fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014837 not found in 156aa AT2G40435.1 1st_not 0.437908496 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56220.1     MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQS
pt014837_POPTR_ MVSREQKRAAK-QKKLQLLRSITNSHAHDKASIILDASNYIKDLKQRVEKLNQDVATAAS
                *****:**.:. ::*::******:***..::***:***:***.***:***:*: .::  *

AT3G56220.1     FRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDTFS
pt014837_POPTR_ F--TSQNFPTIRVEEQENDFLIKVFTARNCQGLLVFILEAFEELGLEVLQARVSTSDSFH
                *  :*:  * : **  *:.*:***:: :*  *:** :**:**:***:*::**** :*:* 

AT3G56220.1     LHAIGSSNNDDG-DCIDAEAVKQAVAEAIRTWSDSHA--
pt014837_POPTR_ LEAIATRENKEAEDHIDTQVVKQVVLQGIQKWIEVSEQE
                *.**.: :*.:. * **::.***.* :.*:.* :
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1     M V S R E H K R G S S L R E K F H L L R S I T D S H A E S E T S I I V D A S K Y I K K L K Q K V E K I N N A T T S E Q S
pt014837_POPTR_    M V S R E Q K R A A K - Q K K L Q L L R S I T N S H A H D K A S I I L D A S N Y I K D L K Q R V E K L N Q D V A T A A S
 
AT3G56220.1     F R E S S D P N P M V T V E T L E K G F M I K V M S R K N E A G M L V C V L E T F E D L G L D V V E A R V S C T D T F S
pt014837_POPTR_    F - - T S Q N F P T I R V E E Q E N D F L I K V F T A R N C Q G L L V F I L E A F E E L G L E V L Q A R V S T S D S F H
 
AT3G56220.1     L H A I G S S N N D D G - D C I D A E A V K Q A V A E A I R T W S D S H A - -
pt014837_POPTR_    L E A I A T R E N K E A E D H I D T Q V V K Q V V L Q G I Q K W I E V S E Q E
 
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