fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007240 not found in 146aa AT2G40435.1 not_not 0.424836601 III
Pt044139 not found in 146aa AT2G40435.1 not_not 0.415032679 III
Pt012554 not found in 156aa AT2G40435.1 not_not 0.408496732 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G56220.1     MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQS
pt012554_POPTR_ MFSREQER-EAMFKKLQLLRSITNSHAHDKASVILDASKYIKDLKQRVERLNQDIATAAS
pt007240_POPTR_ MSSKKKKK-AALYEK---LRAATNSNAMNKTSIIVDASKYIGELKKKVDRLNHEIGT---
pt044139_POPTR_ MSSRKKKK-AALYEK---LRAATNSNAMNKTSIIVDASKYIGELKNKVDRLKKEIGT---
                * *:::::  :: :*   **: *:*:* .::*:*:****** .**::*:::::   :   

AT3G56220.1     FRESSDPN----PMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCT
pt012554_POPTR_ FTGENFPT------IRVEEQEDDFLIKVFTTRNCQGLLVFILEAFEELSLEVLQARVSTS
pt007240_POPTR_ ---SSTPQNSLSAQVTVETLEKGFLINVFSGKNCPGLLVSILEAFDELGLDVLDARVSCE
pt044139_POPTR_ ---SSTPQNSLPAQVTVENLEKGFLINVFSGKNCPGLLVSILEAFEELGLDVLDARVSCE
                   .. *       : **  *..*:*:*:: :*  *:** :**:*::*.*:*::****  

AT3G56220.1     DTFSLHAIGSSNNDDGD-CIDAEAVKQAVAEAIRTWSDSHA--
pt012554_POPTR_ DSFILEAIATRENKEADDHIDAQVVEQVVLQGIQKWIEVSEQE
pt007240_POPTR_ DNFLLEAIGGDQNQGH----DAQVVKQAVLQAIHNWNGGR---
pt044139_POPTR_ DNFQLEAIGGDQNQGH----DAQVVKQAVLQAIHNWNEGS---
                *.* *.**.  :*.      **:.*:*.* :.*:.*
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1     M V S R E H K R G S S L R E K F H L L R S I T D S H A E S E T S I I V D A S K Y I K K L K Q K V E K I N N A T T S E Q S
pt012554_POPTR_    M F S R E Q E R - E A M F K K L Q L L R S I T N S H A H D K A S V I L D A S K Y I K D L K Q R V E R L N Q D I A T A A S
pt007240_POPTR_    M S S K K K K K - A A L Y E K - - - L R A A T N S N A M N K T S I I V D A S K Y I G E L K K K V D R L N H E I G T - - -
pt044139_POPTR_    M S S R K K K K - A A L Y E K - - - L R A A T N S N A M N K T S I I V D A S K Y I G E L K N K V D R L K K E I G T - - -
 
AT3G56220.1     F R E S S D P N - - - - P M V T V E T L E K G F M I K V M S R K N E A G M L V C V L E T F E D L G L D V V E A R V S C T
pt012554_POPTR_    F T G E N F P T - - - - - - I R V E E Q E D D F L I K V F T T R N C Q G L L V F I L E A F E E L S L E V L Q A R V S T S
pt007240_POPTR_    - - - S S T P Q N S L S A Q V T V E T L E K G F L I N V F S G K N C P G L L V S I L E A F D E L G L D V L D A R V S C E
pt044139_POPTR_    - - - S S T P Q N S L P A Q V T V E N L E K G F L I N V F S G K N C P G L L V S I L E A F E E L G L D V L D A R V S C E
 
AT3G56220.1     D T F S L H A I G S S N N D D G D - C I D A E A V K Q A V A E A I R T W S D S H A - -
pt012554_POPTR_    D S F I L E A I A T R E N K E A D D H I D A Q V V E Q V V L Q G I Q K W I E V S E Q E
pt007240_POPTR_    D N F L L E A I G G D Q N Q G H - - - - D A Q V V K Q A V L Q A I H N W N G G R - - -
pt044139_POPTR_    D N F Q L E A I G G D Q N Q G H - - - - D A Q V V K Q A V L Q A I H N W N E G S - - -
 
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