Input
| Putative repression domain
|
|
AT3G56220.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt014837 |
not found in 156aa |
AT2G40435.1 |
1st_not |
0.437908496 |
II |
Pt007240 |
not found in 146aa |
AT2G40435.1 |
not_not |
0.424836601 |
III |
Pt044139 |
not found in 146aa |
AT2G40435.1 |
not_not |
0.415032679 |
III |
Pt012554 |
not found in 156aa |
AT2G40435.1 |
not_not |
0.408496732 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT3G56220.1 MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQS
pt007240_POPTR_ MSSKKKKK-AALYEK---LRAATNSNAMNKTSIIVDASKYIGELKKKVDRLNHEIGTSST
pt012554_POPTR_ MFSREQER-EAMFKKLQLLRSITNSHAHDKASVILDASKYIKDLKQRVERLNQDIATAAS
pt044139_POPTR_ MSSRKKKK-AALYEK---LRAATNSNAMNKTSIIVDASKYIGELKNKVDRLKKEIGTSST
pt014837_POPTR_ MVSREQKR-AAKQKKLQLLRSITNSHAHDKASIILDASNYIKDLKQRVEKLNQDVATAAS
* *::::: : :* **: *:*:* .::*:*:***:** .**::*::::: : :
AT3G56220.1 FRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDTFS
pt007240_POPTR_ PQNSLSAQ--VTVETLEKGFLINVFSGKNCPGLLVSILEAFDELGLDVLDARVSCEDNFL
pt012554_POPTR_ FTGENFPT--IRVEEQEDDFLIKVFTTRNCQGLLVFILEAFEELSLEVLQARVSTSDSFI
pt044139_POPTR_ PQNSLPAQ--VTVENLEKGFLINVFSGKNCPGLLVSILEAFEELGLDVLDARVSCEDNFQ
pt014837_POPTR_ FTSQNFPT--IRVEEQENDFLIKVFTARNCQGLLVFILEAFEELGLEVLQARVSTSDSFH
. . : ** *..*:*:*:: :* *:** :**:*::*.*:*::**** *.*
AT3G56220.1 LHAIGSSNNDDG-DCIDAEAVKQAVAEAIRTWSDSHA--
pt007240_POPTR_ LEAIGGDQNQ---GH-DAQVVKQAVLQAIHNWNGGR---
pt012554_POPTR_ LEAIATRENKEADDHIDAQVVEQVVLQGIQKWIEVSEQE
pt044139_POPTR_ LEAIGGDQNQ---GH-DAQVVKQAVLQAIHNWNEGS---
pt014837_POPTR_ LEAIATRENKEAEDHIDTQVVKQVVLQGIQKWIEVSEQE
*.**. :*. . *::.*:*.* :.*:.*
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1 |
M |
V |
S |
R |
E |
H |
K |
R |
G |
S |
S |
L |
R |
E |
K |
F |
H |
L |
L |
R |
S |
I |
T |
D |
S |
H |
A |
E |
S |
E |
T |
S |
I |
I |
V |
D |
A |
S |
K |
Y |
I |
K |
K |
L |
K |
Q |
K |
V |
E |
K |
I |
N |
N |
A |
T |
T |
S |
E |
Q |
S |
pt007240_POPTR_ |
M |
S |
S |
K |
K |
K |
K |
K |
- |
A |
A |
L |
Y |
E |
K |
- |
- |
- |
L |
R |
A |
A |
T |
N |
S |
N |
A |
M |
N |
K |
T |
S |
I |
I |
V |
D |
A |
S |
K |
Y |
I |
G |
E |
L |
K |
K |
K |
V |
D |
R |
L |
N |
H |
E |
I |
G |
T |
S |
S |
T |
pt012554_POPTR_ |
M |
F |
S |
R |
E |
Q |
E |
R |
- |
E |
A |
M |
F |
K |
K |
L |
Q |
L |
L |
R |
S |
I |
T |
N |
S |
H |
A |
H |
D |
K |
A |
S |
V |
I |
L |
D |
A |
S |
K |
Y |
I |
K |
D |
L |
K |
Q |
R |
V |
E |
R |
L |
N |
Q |
D |
I |
A |
T |
A |
A |
S |
pt044139_POPTR_ |
M |
S |
S |
R |
K |
K |
K |
K |
- |
A |
A |
L |
Y |
E |
K |
- |
- |
- |
L |
R |
A |
A |
T |
N |
S |
N |
A |
M |
N |
K |
T |
S |
I |
I |
V |
D |
A |
S |
K |
Y |
I |
G |
E |
L |
K |
N |
K |
V |
D |
R |
L |
K |
K |
E |
I |
G |
T |
S |
S |
T |
pt014837_POPTR_ |
M |
V |
S |
R |
E |
Q |
K |
R |
- |
A |
A |
K |
Q |
K |
K |
L |
Q |
L |
L |
R |
S |
I |
T |
N |
S |
H |
A |
H |
D |
K |
A |
S |
I |
I |
L |
D |
A |
S |
N |
Y |
I |
K |
D |
L |
K |
Q |
R |
V |
E |
K |
L |
N |
Q |
D |
V |
A |
T |
A |
A |
S |
|
AT3G56220.1 |
F |
R |
E |
S |
S |
D |
P |
N |
P |
M |
V |
T |
V |
E |
T |
L |
E |
K |
G |
F |
M |
I |
K |
V |
M |
S |
R |
K |
N |
E |
A |
G |
M |
L |
V |
C |
V |
L |
E |
T |
F |
E |
D |
L |
G |
L |
D |
V |
V |
E |
A |
R |
V |
S |
C |
T |
D |
T |
F |
S |
pt007240_POPTR_ |
P |
Q |
N |
S |
L |
S |
A |
Q |
- |
- |
V |
T |
V |
E |
T |
L |
E |
K |
G |
F |
L |
I |
N |
V |
F |
S |
G |
K |
N |
C |
P |
G |
L |
L |
V |
S |
I |
L |
E |
A |
F |
D |
E |
L |
G |
L |
D |
V |
L |
D |
A |
R |
V |
S |
C |
E |
D |
N |
F |
L |
pt012554_POPTR_ |
F |
T |
G |
E |
N |
F |
P |
T |
- |
- |
I |
R |
V |
E |
E |
Q |
E |
D |
D |
F |
L |
I |
K |
V |
F |
T |
T |
R |
N |
C |
Q |
G |
L |
L |
V |
F |
I |
L |
E |
A |
F |
E |
E |
L |
S |
L |
E |
V |
L |
Q |
A |
R |
V |
S |
T |
S |
D |
S |
F |
I |
pt044139_POPTR_ |
P |
Q |
N |
S |
L |
P |
A |
Q |
- |
- |
V |
T |
V |
E |
N |
L |
E |
K |
G |
F |
L |
I |
N |
V |
F |
S |
G |
K |
N |
C |
P |
G |
L |
L |
V |
S |
I |
L |
E |
A |
F |
E |
E |
L |
G |
L |
D |
V |
L |
D |
A |
R |
V |
S |
C |
E |
D |
N |
F |
Q |
pt014837_POPTR_ |
F |
T |
S |
Q |
N |
F |
P |
T |
- |
- |
I |
R |
V |
E |
E |
Q |
E |
N |
D |
F |
L |
I |
K |
V |
F |
T |
A |
R |
N |
C |
Q |
G |
L |
L |
V |
F |
I |
L |
E |
A |
F |
E |
E |
L |
G |
L |
E |
V |
L |
Q |
A |
R |
V |
S |
T |
S |
D |
S |
F |
H |
|
AT3G56220.1 |
L |
H |
A |
I |
G |
S |
S |
N |
N |
D |
D |
G |
- |
D |
C |
I |
D |
A |
E |
A |
V |
K |
Q |
A |
V |
A |
E |
A |
I |
R |
T |
W |
S |
D |
S |
H |
A |
- |
- |
pt007240_POPTR_ |
L |
E |
A |
I |
G |
G |
D |
Q |
N |
Q |
- |
- |
- |
G |
H |
- |
D |
A |
Q |
V |
V |
K |
Q |
A |
V |
L |
Q |
A |
I |
H |
N |
W |
N |
G |
G |
R |
- |
- |
- |
pt012554_POPTR_ |
L |
E |
A |
I |
A |
T |
R |
E |
N |
K |
E |
A |
D |
D |
H |
I |
D |
A |
Q |
V |
V |
E |
Q |
V |
V |
L |
Q |
G |
I |
Q |
K |
W |
I |
E |
V |
S |
E |
Q |
E |
pt044139_POPTR_ |
L |
E |
A |
I |
G |
G |
D |
Q |
N |
Q |
- |
- |
- |
G |
H |
- |
D |
A |
Q |
V |
V |
K |
Q |
A |
V |
L |
Q |
A |
I |
H |
N |
W |
N |
E |
G |
S |
- |
- |
- |
pt014837_POPTR_ |
L |
E |
A |
I |
A |
T |
R |
E |
N |
K |
E |
A |
E |
D |
H |
I |
D |
T |
Q |
V |
V |
K |
Q |
V |
V |
L |
Q |
G |
I |
Q |
K |
W |
I |
E |
V |
S |
E |
Q |
E |
|
|