fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012952 not found in 163aa AT2G40435.1 1st_not 0.454248366 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56220.1     -MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQ
Os012952_Os03t0 MMSSRERKKAAALQEKLQILRSITHSHALSNTSILMDASKYIKELKQKVVRLNQEIACAQ
                 * ***:*:.::*:**:::*****.*** *:***::*******:***** ::*:  :. *

AT3G56220.1     -SFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDT
Os012952_Os03t0 DALRQNR-----VTVETLRHGFLVNVFSGKSCPGLLVSILEAFDELGLSVLEATASCTDT
                 ::*:.      ******.:**:::*:* *. .*:**.:**:*::***.*:** .*****

AT3G56220.1     FSLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWS----DSHA--------
Os012952_Os03t0 FRLEAIGSENLMEK--VDEHVVKQAVLRAIRSCSGSGGDHHDDDDDDDDE
                * *.****.*  :   :* ..***** .***: *    * *
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1     - M V S R E H K R G S S L R E K F H L L R S I T D S H A E S E T S I I V D A S K Y I K K L K Q K V E K I N N A T T S E Q
Os012952_Os03t0    M M S S R E R K K A A A L Q E K L Q I L R S I T H S H A L S N T S I L M D A S K Y I K E L K Q K V V R L N Q E I A C A Q
 
AT3G56220.1     - S F R E S S D P N P M V T V E T L E K G F M I K V M S R K N E A G M L V C V L E T F E D L G L D V V E A R V S C T D T
Os012952_Os03t0    D A L R Q N R - - - - - V T V E T L R H G F L V N V F S G K S C P G L L V S I L E A F D E L G L S V L E A T A S C T D T
 
AT3G56220.1     F S L H A I G S S N N D D G D C I D A E A V K Q A V A E A I R T W S - - - - D S H A - - - - - - - -
Os012952_Os03t0    F R L E A I G S E N L M E K - - V D E H V V K Q A V L R A I R S C S G S G G D H H D D D D D D D D E
 
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