fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012952 not found in 163aa AT2G40435.1 1st_not 0.454248366 II
Os029583 not found in 157aa AT2G40435.1 not_not 0.441176470 III
Os021128 not found in 153aa AT2G40435.1 not_not 0.428104575 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G56220.1     -MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQ
Os012952_Os03t0 MMSSRERKKAAALQEKLQILRSITHSHALSNTSILMDASKYIKELKQKVVRLNQEIACAQ
Os021128_Os05t0 -MVSREQKR-ASLHEKLQILRTLTHSHAVNKMSIISDASTYIKDLKQKIAALNKELGCAK
Os029583_Os07t0 -MMSRERKKAAALHEKLQILRSITHSHALSNTSIITDASEYIKELKQKVVRLNKEIACAE
                 * ***:*: ::*:**:::**::*.*** .: **: *** ***.****:  :*:   . :

AT3G56220.1     SFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDTF
Os012952_Os03t0 -DALRQNR---VTVETLRHGFLVNVFSGKSCPGLLVSILEAFDELGLSVLEATASCTDTF
Os021128_Os05t0 NMNICEEPSPVVRVQVLDKGFLINVFMDKSSPGLLSSILQAFDELGLTVIEARASCSNSF
Os029583_Os07t0 AAALRQNSIPTVTVETLGHGFLINVFSDKSCPGLLVSILEAFDELGLNVLEATASCDDTF
                     .:    * *:.* :**:::*:  *. .*:* .:*::*::*** *:** .** ::*

AT3G56220.1     SLHAIGSSNNDDGDCIDAEAVKQAVAEAI--RTWSDSHA------------
Os012952_Os03t0 RLEAIGSENLM--EKVDEHVVKQAVLRAI--RSCSGSGGDHHDDDDDDDDE
Os021128_Os05t0 RLEAVGGEHEEADGGIDANAVELAVMQAI--KSTPGK--------------
Os029583_Os07t0 RLEAVGGEN-----QVDEHVIKQTVLQAISNSNCSESSGDQEG--------
                 *.*:*..:      :* ..:: :* .**   . . .
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1     - M V S R E H K R G S S L R E K F H L L R S I T D S H A E S E T S I I V D A S K Y I K K L K Q K V E K I N N A T T S E Q
Os012952_Os03t0    M M S S R E R K K A A A L Q E K L Q I L R S I T H S H A L S N T S I L M D A S K Y I K E L K Q K V V R L N Q E I A C A Q
Os021128_Os05t0    - M V S R E Q K R - A S L H E K L Q I L R T L T H S H A V N K M S I I S D A S T Y I K D L K Q K I A A L N K E L G C A K
Os029583_Os07t0    - M M S R E R K K A A A L H E K L Q I L R S I T H S H A L S N T S I I T D A S E Y I K E L K Q K V V R L N K E I A C A E
 
AT3G56220.1     S F R E S S D P N P M V T V E T L E K G F M I K V M S R K N E A G M L V C V L E T F E D L G L D V V E A R V S C T D T F
Os012952_Os03t0    - D A L R Q N R - - - V T V E T L R H G F L V N V F S G K S C P G L L V S I L E A F D E L G L S V L E A T A S C T D T F
Os021128_Os05t0    N M N I C E E P S P V V R V Q V L D K G F L I N V F M D K S S P G L L S S I L Q A F D E L G L T V I E A R A S C S N S F
Os029583_Os07t0    A A A L R Q N S I P T V T V E T L G H G F L I N V F S D K S C P G L L V S I L E A F D E L G L N V L E A T A S C D D T F
 
AT3G56220.1     S L H A I G S S N N D D G D C I D A E A V K Q A V A E A I - - R T W S D S H A - - - - - - - - - - - -
Os012952_Os03t0    R L E A I G S E N L M - - E K V D E H V V K Q A V L R A I - - R S C S G S G G D H H D D D D D D D D E
Os021128_Os05t0    R L E A V G G E H E E A D G G I D A N A V E L A V M Q A I - - K S T P G K - - - - - - - - - - - - - -
Os029583_Os07t0    R L E A V G G E N - - - - - Q V D E H V I K Q T V L Q A I S N S N C S E S S G D Q E G - - - - - - - -
 
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