fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021553 not found in 287aa AT2G40435.1 1st_not 0.428104575 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56220.1     ---------MVSREHKRGS---------SLREKFHLLRSITDSH----------------
Sb021553_Sorbi1 ERLVGEKDDVVKGAQEAGGCSSGEAEDPPLHHSFPRFEQHIDNHGRVGVHQGAEAEGGEA
                         :*.  :: *.         .*:..*  :..  *.*                

AT3G56220.1     ----------AESETSIIVDASKYIKKL-----KQKV---EKINNATTSEQSFRESSDPN
Sb021553_Sorbi1 EPGDCLRARCAETQVVVLSDGDRGNPRSAGVVPRQRVLRQELPGAARLRPGSLRRARAQR
                          **::. :: *..:   :      :*:*   *  . *     *:*.:   .

AT3G56220.1     PMVTVETLEKGFMIKVMSR-------------------KNEAGMLVC---VLETFEDLGL
Sb021553_Sorbi1 P--------PGH--RLLRRLLPPRGCGRRERGGQRGRARREAGRPAGRQELLRERQRAGR
                *         *.  ::: *                   :.***  .    :*.  :  * 

AT3G56220.1     DVVEARVSCTDTFSLHAIGSSNNDDGDCIDAEAVKQAVAEAIRT--WSDSHA---
Sb021553_Sorbi1 GV--SRGQADERVSTHQASTCIGRTSSCPGPYVVVLRIHELSRDPLYASSSVPSL
                .*  :* .. : .* *  .:. .  ..* .. .*   : *  *   ::.* .
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1     - - - - - - - - - M V S R E H K R G S - - - - - - - - - S L R E K F H L L R S I T D S H - - - - - - - - - - - - - - - -
Sb021553_Sorbi1    E R L V G E K D D V V K G A Q E A G G C S S G E A E D P P L H H S F P R F E Q H I D N H G R V G V H Q G A E A E G G E A
 
AT3G56220.1     - - - - - - - - - - A E S E T S I I V D A S K Y I K K L - - - - - K Q K V - - - E K I N N A T T S E Q S F R E S S D P N
Sb021553_Sorbi1    E P G D C L R A R C A E T Q V V V L S D G D R G N P R S A G V V P R Q R V L R Q E L P G A A R L R P G S L R R A R A Q R
 
AT3G56220.1     P M V T V E T L E K G F M I K V M S R - - - - - - - - - - - - - - - - - - - K N E A G M L V C - - - V L E T F E D L G L
Sb021553_Sorbi1    P - - - - - - - - P G H - - R L L R R L L P P R G C G R R E R G G Q R G R A R R E A G R P A G R Q E L L R E R Q R A G R
 
AT3G56220.1     D V V E A R V S C T D T F S L H A I G S S N N D D G D C I D A E A V K Q A V A E A I R T - - W S D S H A - - -
Sb021553_Sorbi1    G V - - S R G Q A D E R V S T H Q A S T C I G R T S S C P G P Y V V V L R I H E L S R D P L Y A S S S V P S L
 
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