fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031914 not found in 157aa AT2G40435.1 1st_not 0.555555555 II
Gm031526 not found in 184aa AT3G56220.1 not_1st 0.421568627 II
Gm048769 not found in 148aa AT3G56220.1 not_1st 0.415032679 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G56220.1     -------------------------MVSREHKRGSSLREKFHLLRSITDSHAESETSIIV
gm031914_Glyma1 -------------------------MVSREQKR-AALHEKLQLLRSITNSHALNKTSIII
gm031526_Glyma1 MAKDFFAQSSPCERESVINLRERENMVSRVHKR-IAMYRNLQLLRSIRYSNSRLKASVLL
gm048769_Glyma1 -------------------------MVSRVHKR-TAMYRNLHLLRSIRYSHS--------
                                         **** :**  :: .:::*****  *::        

AT3G56220.1     DASKYIKKLKQKVEKINNATTSEQSFRESSDPN--PMVTVETLEKGFMIKVMSRKNEAGM
gm031914_Glyma1 DASKYIEELKQKVERLNQHVANAQT---SSDQNTLPMVTVETLEKGFLINVYSAKTCPGL
gm031526_Glyma1 ELSDYIQGLKQKLEELNQLLTVATA-RKIADYDPMPKLEVETQEEAFVIKVLSESSCQGL
gm048769_Glyma1 -VSDYIQGLKQKLEELNQ-LTVATA-RKIVDYDPMPKVEVETQEEGFVIKVLSESSCQGL
                  *.**: ****:*.:*:  :   :     * :  * : *** *:.*:*:* * ..  *:

AT3G56220.1     LVCVLETFEDLGLDVVEARVSCTDTFSLHAIG--SSNNDDGD-CIDAEAVKQAVAEAIRT
gm031914_Glyma1 LVSILESFEEIGLNVLEARVTCTDTFRFHAVG--GKNEEQGDEGIDAQTVKQELGQAIKN
gm031526_Glyma1 LVFILEAFEEMGLDVLQARVSCADSFSLEAIGNNKENNEDTH-TLDAQLVEQVVSQAIQN
gm048769_Glyma1 LVFILEAFEELGLDVLQARVSCAHSFSLEALG-NKENNEDTR-PLDAQLVEQVVSQAIQN
                ** :**:**::**:*::***:*:.:* :.*:*   .*:::    :**: *:* :.:**:.

AT3G56220.1     WSDSHA--
gm031914_Glyma1 WSQNADQK
gm031526_Glyma1 WWEVSQI-
gm048769_Glyma1 WREVSQI-
                * :
BoxShade v3.31 C (beta, 970507) Output
AT3G56220.1     - - - - - - - - - - - - - - - - - - - - - - - - - M V S R E H K R G S S L R E K F H L L R S I T D S H A E S E T S I I V
gm031914_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - M V S R E Q K R - A A L H E K L Q L L R S I T N S H A L N K T S I I I
gm031526_Glyma1    M A K D F F A Q S S P C E R E S V I N L R E R E N M V S R V H K R - I A M Y R N L Q L L R S I R Y S N S R L K A S V L L
gm048769_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - M V S R V H K R - T A M Y R N L H L L R S I R Y S H S - - - - - - - -
 
AT3G56220.1     D A S K Y I K K L K Q K V E K I N N A T T S E Q S F R E S S D P N - - P M V T V E T L E K G F M I K V M S R K N E A G M
gm031914_Glyma1    D A S K Y I E E L K Q K V E R L N Q H V A N A Q T - - - S S D Q N T L P M V T V E T L E K G F L I N V Y S A K T C P G L
gm031526_Glyma1    E L S D Y I Q G L K Q K L E E L N Q L L T V A T A - R K I A D Y D P M P K L E V E T Q E E A F V I K V L S E S S C Q G L
gm048769_Glyma1    - V S D Y I Q G L K Q K L E E L N Q - L T V A T A - R K I V D Y D P M P K V E V E T Q E E G F V I K V L S E S S C Q G L
 
AT3G56220.1     L V C V L E T F E D L G L D V V E A R V S C T D T F S L H A I G - - S S N N D D G D - C I D A E A V K Q A V A E A I R T
gm031914_Glyma1    L V S I L E S F E E I G L N V L E A R V T C T D T F R F H A V G - - G K N E E Q G D E G I D A Q T V K Q E L G Q A I K N
gm031526_Glyma1    L V F I L E A F E E M G L D V L Q A R V S C A D S F S L E A I G N N K E N N E D T H - T L D A Q L V E Q V V S Q A I Q N
gm048769_Glyma1    L V F I L E A F E E L G L D V L Q A R V S C A H S F S L E A L G - N K E N N E D T R - P L D A Q L V E Q V V S Q A I Q N
 
AT3G56220.1     W S D S H A - -
gm031914_Glyma1    W S Q N A D Q K
gm031526_Glyma1    W W E V S Q I -
gm048769_Glyma1    W R E V S Q I -
 
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