fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm019992 not found in 295aa AT3G56850.1 1st_1st 0.318345323 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56850.1     ---------MDSQRGIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLK
Sm019992_Selmo1 MLHPPPNGGVGPQR--------SGLGRQGSIYSLTLEELQNSMLDQGK-IGSMNMDEFMK
                         :..**        ..*.**.*:*****:*:** : ..** :****:**::*

AT3G56850.1     SVCSVEANQPSSMAVNGGAA---------AQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQ
Sm019992_Selmo1 NVWTAEENQGGAANTNTSTATSTATDNPPAPSSLQRQSSVSIPRTLSQKTVDEVWKEIQV
                .* :.* ** .:  .* .:*         * ..*.**.*:::** **:********:** 

AT3G56850.1     NKNGGSAHERRDKQPTLGEMTLEDLLLKAGVVTETIPGSNHDGPVGG-----GSAGSGAG
Sm019992_Selmo1 QK-----QQQQQQDLSYGEMTLEDFLIRAGVVKE-----DTDATSGGVVQAIGPQGTIPN
                :*     ::::::: : *******:*::****.*     : *.. **     *. *: ..

AT3G56850.1     LGQNITQVGPWIQY--------HQLPSMPQ----------PQAFMPYPVSDMQAMVSQSS
Sm019992_Selmo1 SIDSMAQNPDWYNYQVKQQQLMHQAADFSKRPNLIVPAGHPGAFFDAP---YDAVPSSLA
                  :.::*   * :*        ** ..:.:          * **:  *    :*: *. :

AT3G56850.1     LMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSR
Sm019992_Selmo1 LSPGMATPEAPGKKR-SLDLVVEKTVERRQRRMIKNRESAARSRARKQAYTVELEAELTQ
                *  *:: .::**:** : . **********:******************** *** ::::

AT3G56850.1     LEEENERLRKQKEVEKILPSVPPPDPKRQLRRTSSAPF
Sm019992_Selmo1 LKEENTRLKRW-----------------QVRLDHS---
                *:*** **::                  *:*   *
BoxShade v3.31 C (beta, 970507) Output
AT3G56850.1     - - - - - - - - - M D S Q R G I V E Q A K S Q S L N R Q S S L Y S L T L D E V Q N H L G S S G K A L G S M N L D E L L K
Sm019992_Selmo1    M L H P P P N G G V G P Q R - - - - - - - - S G L G R Q G S I Y S L T L E E L Q N S M L D Q G K - I G S M N M D E F M K
 
AT3G56850.1     S V C S V E A N Q P S S M A V N G G A A - - - - - - - - - A Q E G L S R Q G S L T L P R D L S K K T V D E V W K D I Q Q
Sm019992_Selmo1    N V W T A E E N Q G G A A N T N T S T A T S T A T D N P P A P S S L Q R Q S S V S I P R T L S Q K T V D E V W K E I Q V
 
AT3G56850.1     N K N G G S A H E R R D K Q P T L G E M T L E D L L L K A G V V T E T I P G S N H D G P V G G - - - - - G S A G S G A G
Sm019992_Selmo1    Q K - - - - - Q Q Q Q Q Q D L S Y G E M T L E D F L I R A G V V K E - - - - - D T D A T S G G V V Q A I G P Q G T I P N
 
AT3G56850.1     L G Q N I T Q V G P W I Q Y - - - - - - - - H Q L P S M P Q - - - - - - - - - - P Q A F M P Y P V S D M Q A M V S Q S S
Sm019992_Selmo1    S I D S M A Q N P D W Y N Y Q V K Q Q Q L M H Q A A D F S K R P N L I V P A G H P G A F F D A P - - - Y D A V P S S L A
 
AT3G56850.1     L M G G L S D T Q T P G R K R V A S G E V V E K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T H E L E I K V S R
Sm019992_Selmo1    L S P G M A T P E A P G K K R - S L D L V V E K T V E R R Q R R M I K N R E S A A R S R A R K Q A Y T V E L E A E L T Q
 
AT3G56850.1     L E E E N E R L R K Q K E V E K I L P S V P P P D P K R Q L R R T S S A P F
Sm019992_Selmo1    L K E E N T R L K R W - - - - - - - - - - - - - - - - - Q V R L D H S - - -
 
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