fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034243 not found in 321aa AT3G56850.1 not_1st 0.512589928 II
Pt042548 not found in 322aa AT3G56850.1 not_1st 0.508992805 II
Pt044899 not found in 257aa AT3G56850.1 not_1st 0.505395683 II
Pt033837 not found in 321aa AT3G56850.1 not_1st 0.487410071 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G56850.1     -----MDSQ---RGIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKS
pt042548_POPTR_ MGMQTMGSQGDGSSHHKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKN
pt034243_POPTR_ MGMQTKGSQGDGSSHYKQSQLQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKN
pt033837_POPTR_ MGTQTMGSQGDGSSHHMQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKN
pt044899_POPTR_ -----MGSQ---VGSFEEENPESLIGQGSLYSLTLDEVQNQLGNLGKPLGSMNLDELLKS
                      .**    .   : : :.*  *.*:**********:**. **.*.*********.

AT3G56850.1     VCSVEANQPSSMAVNGGA-AAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQ-NKNGGSAH
pt042548_POPTR_ VWTVEANRTMGLEVEGIPFANQTALQHQASISLTSALSKKTVDEVWKDIQQ-SKHDGEMK
pt034243_POPTR_ VWTVEATQTMGLEVEGTPFANQTALQRQASLSLTSDLSKKTVDEVWKDIQQ-SKNDRGIK
pt033837_POPTR_ VWTVEAAQTTALEVEGTPFANQTALQRQASLSLTSALSKKTVDEVWKDIQQ-SKHDEEMK
pt044899_POPTR_ V-DTEGSWSSP-------------VHRQGSLTLSRSLSKKTVEEVWRNIQQENKKDAENQ
                *  .*.  .               : :*.*::*.  ******:***::*** .*:.   :

AT3G56850.1     ERRDKQPTLGEMTLEDLLLKAGVVTETIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQ
pt042548_POPTR_ SR-ERQPTLGEMTLEDFLVKAGVVAEASVDKKDGGSV----VAVDTHAAQQFLQQSQWVQ
pt034243_POPTR_ SR-ERQPTFGEMTLEDFLVKAGVVDEGSMDKKDGGSI----VGVDTNAAQQFQQQGQWLQ
pt033837_POPTR_ SK-ERQPTFGEMTLEDFLVKAGVVAEASVDKKDGGSV----VLVDTNAAQQFLQQSQWVQ
pt044899_POPTR_ ER---NAPFGEMTLEDFLVKAGVVTESAPQQQQES----------------------FMQ
                .:   :..:*******:*:***** *    .:. .                      ::*

AT3G56850.1     YHQL-------PSM--------PQPQAF---------MPYPVSDMQAMVSQSSLMGGLSD
pt042548_POPTR_ YPPHPQYHHPQQSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVT---LPPPLMGTLSD
pt034243_POPTR_ YPPQPQYQQPQQSMMGVYMPGQSTLQPLHMGAGSIMDVSYSENQVA---LPPPLMGTLSD
pt033837_POPTR_ YPPQPQYQHPQQSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVP---VPPPLTGTLSD
pt044899_POPTR_ GHPV------QQSL--------PVADA-----------AYPNSQMN--LSPSSLMGTLSD
                            *:        .  :.           .*. .::      ..* * ***

AT3G56850.1     TQTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENER
pt042548_POPTR_ TQTPARKRGVPEDMIGKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENER
pt034243_POPTR_ TQAPARKRGVP-DMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENER
pt033837_POPTR_ TQTPARKRGVP-NMFEKTVERRQKRMIKNRESAARSRARKQAYTSELENKVSRLEEENGR
pt044899_POPTR_ TQTPGRKRVASGDVAEKTVERKQKRMIKNRESAARSRARRQAYTNELEIKVYHLEEENER
                **:*.*** .. ::  *****:*****************:**** *** *: :***** *

AT3G56850.1     LRKQKEVEKILPSVPPPDPKRQLRRTSSAPF
pt042548_POPTR_ LRKRRELENMLPCVPLPEPKYQLRRTASAPF
pt034243_POPTR_ LRKLRELENMLPCVPLPEPKYQLRRTTSAPF
pt033837_POPTR_ LRKRRELENMLPCIPLPEPKYQLRRTTSAPF
pt044899_POPTR_ LRRQKEVEKVLPCAPPPEPKSQLRRTSSASF
                **: :*:*::**. * *:** *****:**.*
BoxShade v3.31 C (beta, 970507) Output
AT3G56850.1     - - - - - M D S Q - - - R G I V E Q A K S Q S L N R Q S S L Y S L T L D E V Q N H L G S S G K A L G S M N L D E L L K S
pt042548_POPTR_    M G M Q T M G S Q G D G S S H H K Q S Q F Q P L V R Q N S M Y S L T L D E V Q N Q L G D L G K P L S S M N L D E L L K N
pt034243_POPTR_    M G M Q T K G S Q G D G S S H Y K Q S Q L Q P L A R Q N S M Y S L T L D E V Q N Q L G D L G K P L S S M N L D E L L K N
pt033837_POPTR_    M G T Q T M G S Q G D G S S H H M Q S Q F Q P L V R Q N S M Y S L T L D E V Q N Q L G D L G K P L S S M N L D E L L K N
pt044899_POPTR_    - - - - - M G S Q - - - V G S F E E E N P E S L I G Q G S L Y S L T L D E V Q N Q L G N L G K P L G S M N L D E L L K S
 
AT3G56850.1     V C S V E A N Q P S S M A V N G G A - A A Q E G L S R Q G S L T L P R D L S K K T V D E V W K D I Q Q - N K N G G S A H
pt042548_POPTR_    V W T V E A N R T M G L E V E G I P F A N Q T A L Q H Q A S I S L T S A L S K K T V D E V W K D I Q Q - S K H D G E M K
pt034243_POPTR_    V W T V E A T Q T M G L E V E G T P F A N Q T A L Q R Q A S L S L T S D L S K K T V D E V W K D I Q Q - S K N D R G I K
pt033837_POPTR_    V W T V E A A Q T T A L E V E G T P F A N Q T A L Q R Q A S L S L T S A L S K K T V D E V W K D I Q Q - S K H D E E M K
pt044899_POPTR_    V - D T E G S W S S P - - - - - - - - - - - - - V H R Q G S L T L S R S L S K K T V E E V W R N I Q Q E N K K D A E N Q
 
AT3G56850.1     E R R D K Q P T L G E M T L E D L L L K A G V V T E T I P G S N H D G P V G G G S A G S G A G L G Q N I T Q V G P W I Q
pt042548_POPTR_    S R - E R Q P T L G E M T L E D F L V K A G V V A E A S V D K K D G G S V - - - - V A V D T H A A Q Q F L Q Q S Q W V Q
pt034243_POPTR_    S R - E R Q P T F G E M T L E D F L V K A G V V D E G S M D K K D G G S I - - - - V G V D T N A A Q Q F Q Q Q G Q W L Q
pt033837_POPTR_    S K - E R Q P T F G E M T L E D F L V K A G V V A E A S V D K K D G G S V - - - - V L V D T N A A Q Q F L Q Q S Q W V Q
pt044899_POPTR_    E R - - - N A P F G E M T L E D F L V K A G V V T E S A P Q Q Q Q E S - - - - - - - - - - - - - - - - - - - - - - F M Q
 
AT3G56850.1     Y H Q L - - - - - - - P S M - - - - - - - - P Q P Q A F - - - - - - - - - M P Y P V S D M Q A M V S Q S S L M G G L S D
pt042548_POPTR_    Y P P H P Q Y H H P Q Q S M M G V Y M P G Q P M P Q P L H M G A G S M M D V S Y P E N Q V T - - - L P P P L M G T L S D
pt034243_POPTR_    Y P P Q P Q Y Q Q P Q Q S M M G V Y M P G Q S T L Q P L H M G A G S I M D V S Y S E N Q V A - - - L P P P L M G T L S D
pt033837_POPTR_    Y P P Q P Q Y Q H P Q Q S M M G V Y M P G Q P M P Q P L H M G A G S M M D V S Y P E N Q V P - - - V P P P L T G T L S D
pt044899_POPTR_    G H P V - - - - - - Q Q S L - - - - - - - - P V A D A - - - - - - - - - - - A Y P N S Q M N - - L S P S S L M G T L S D
 
AT3G56850.1     T Q T P G R K R V A S G E V V E K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E R
pt042548_POPTR_    T Q T P A R K R G V P E D M I G K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T N E L E N K V S R L E E E N E R
pt034243_POPTR_    T Q A P A R K R G V P - D M I E K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T N E L E N K I S R L E E E N E R
pt033837_POPTR_    T Q T P A R K R G V P - N M F E K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T S E L E N K V S R L E E E N G R
pt044899_POPTR_    T Q T P G R K R V A S G D V A E K T V E R K Q K R M I K N R E S A A R S R A R R Q A Y T N E L E I K V Y H L E E E N E R
 
AT3G56850.1     L R K Q K E V E K I L P S V P P P D P K R Q L R R T S S A P F
pt042548_POPTR_    L R K R R E L E N M L P C V P L P E P K Y Q L R R T A S A P F
pt034243_POPTR_    L R K L R E L E N M L P C V P L P E P K Y Q L R R T T S A P F
pt033837_POPTR_    L R K R R E L E N M L P C I P L P E P K Y Q L R R T T S A P F
pt044899_POPTR_    L R R Q K E V E K V L P C A P P P E P K S Q L R R T S S A S F
 
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