fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007527 not found in 267aa AT3G56850.1 1st_1st 0.517985611 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56850.1     MDSQRGIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEA-N
pt007527_POPTR_ MGSQGGSFEEENPESLMGQGSLCSLTLDEVQNQLGNLGKPLGSMNLDDLLKSVDNVGAWS
                *.** * .*: :.:**  *.** *********:**. **.*******:***** .* * .

AT3G56850.1     QPSSMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAHERRDKQP--
pt007527_POPTR_ AP--------------MNRQGSLTLSRDLSKKTVEEVWRDIQQ------LDKKDDDNPGR
                 *              :.*******.********:***:****       .:: *.:*  

AT3G56850.1     --TLGEMTLEDLLLKAGVVTETIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLP
pt007527_POPTR_ NAPFGEMTLEDFLVKAGVVTESTPVQQQES--------------------NQWMQF-QLP
                  .:*******:*:*******: * .:::.                    . *:*: ***

AT3G56850.1     SMPQP--QAFM------PYPVSDMQAMVSQSSLMGGLSDTQTPGRKRVASGEVVEKTVER
pt007527_POPTR_ SVQQPVYQNNMMTVVDAAYP--DSQMNISPSSLMGTLSDTQTPGRKRVAPGDVVEKTVER
                *: **  *  *      .**  * *  :* ***** *************.*:********

AT3G56850.1     RQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKR
pt007527_POPTR_ KQKRMIKNRESAARSRARRQAYTHELEIKVSHLEEENERLRKQEKAEKVLPCAPPPEPKS
                :*****************:************:***********::.**:**..***:** 

AT3G56850.1     QLRRTSSAPF
pt007527_POPTR_ QLRRTSSAPL
                *********:
BoxShade v3.31 C (beta, 970507) Output
AT3G56850.1     M D S Q R G I V E Q A K S Q S L N R Q S S L Y S L T L D E V Q N H L G S S G K A L G S M N L D E L L K S V C S V E A - N
pt007527_POPTR_    M G S Q G G S F E E E N P E S L M G Q G S L C S L T L D E V Q N Q L G N L G K P L G S M N L D D L L K S V D N V G A W S
 
AT3G56850.1     Q P S S M A V N G G A A A Q E G L S R Q G S L T L P R D L S K K T V D E V W K D I Q Q N K N G G S A H E R R D K Q P - -
pt007527_POPTR_    A P - - - - - - - - - - - - - - M N R Q G S L T L S R D L S K K T V E E V W R D I Q Q - - - - - - L D K K D D D N P G R
 
AT3G56850.1     - - T L G E M T L E D L L L K A G V V T E T I P G S N H D G P V G G G S A G S G A G L G Q N I T Q V G P W I Q Y H Q L P
pt007527_POPTR_    N A P F G E M T L E D F L V K A G V V T E S T P V Q Q Q E S - - - - - - - - - - - - - - - - - - - - N Q W M Q F - Q L P
 
AT3G56850.1     S M P Q P - - Q A F M - - - - - - P Y P V S D M Q A M V S Q S S L M G G L S D T Q T P G R K R V A S G E V V E K T V E R
pt007527_POPTR_    S V Q Q P V Y Q N N M M T V V D A A Y P - - D S Q M N I S P S S L M G T L S D T Q T P G R K R V A P G D V V E K T V E R
 
AT3G56850.1     R Q K R M I K N R E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E R L R K Q K E V E K I L P S V P P P D P K R
pt007527_POPTR_    K Q K R M I K N R E S A A R S R A R R Q A Y T H E L E I K V S H L E E E N E R L R K Q E K A E K V L P C A P P P E P K S
 
AT3G56850.1     Q L R R T S S A P F
pt007527_POPTR_    Q L R R T S S A P L
 
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