fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004382 not found in 340aa AT3G56850.1 not_1st 0.447841726 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56850.1     MDSQR--------GIVEQ--AKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELL
Os004382_Os01t0 MGSQTMASKAGGGGVARRGGGRMRSLGRQGSMYSLTLDEVQSQL---GEPLHSMNLDELL
                *.**         *:..:  .: :**.**.*:*********.:*   *:.* ********

AT3G56850.1     KSVCSVEANQPSSMAVNGGAAAQ---------EGLSRQGSLTLPRDLSKKTVDEVWKDIQ
Os004382_Os01t0 RSVF------PDGLAIADGAGATTSSQQHQPGSGLLRQGSITMPPELSKKTVDEVWKGIQ
                :**       *..:*: .**.*          .** ****:*:* :***********.**

AT3G56850.1     Q--NKN------GGSAHERRDKQPTLGEMTLEDLLLKAGVVTETIPGS--------NHDG
Os004382_Os01t0 AAPKRNAETGGGGGGGRRRRERQPTLGEVTLEDFLVKAGVVTQ---GSLKELSDVGNVD-
                   ::*      **..:.**::******:****:*:******:   **        * * 

AT3G56850.1     PVGGGSAGSGAGLGQNITQVGP---WI-QYHQ-------------------LPS--MPQP
Os004382_Os01t0 PVGRGVTATGT------VDLAPGSHWIEQYKQQIASTDAHHHGQQGVQGAYFPNRLVPQP
                *** * :.:*:      .::.*   ** **:*                   :*.  :***

AT3G56850.1     QAFMPYPV-----SDMQAMVSQSSLMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKN
Os004382_Os01t0 LNVGPGAILEPSYSDGQ---TSSGMIGGMSDSQTPGRKRGMSGDVADKLMERRQKRMIKN
                  . * .:     ** *   :.*.::**:**:*******  **:*.:* :**********

AT3G56850.1     RESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLRRTSSA
Os004382_Os01t0 RESAARSRARKQAYTNELENKVSRLEEENVRLKRQKELDELICAVPVPEPKYQLRRTSSA
                ***************:*** ********* **::***::::: :** *:** ********

AT3G56850.1     PF
Os004382_Os01t0 DF
                 *
BoxShade v3.31 C (beta, 970507) Output
AT3G56850.1     M D S Q R - - - - - - - - G I V E Q - - A K S Q S L N R Q S S L Y S L T L D E V Q N H L G S S G K A L G S M N L D E L L
Os004382_Os01t0    M G S Q T M A S K A G G G G V A R R G G G R M R S L G R Q G S M Y S L T L D E V Q S Q L - - - G E P L H S M N L D E L L
 
AT3G56850.1     K S V C S V E A N Q P S S M A V N G G A A A Q - - - - - - - - - E G L S R Q G S L T L P R D L S K K T V D E V W K D I Q
Os004382_Os01t0    R S V F - - - - - - P D G L A I A D G A G A T T S S Q Q H Q P G S G L L R Q G S I T M P P E L S K K T V D E V W K G I Q
 
AT3G56850.1     Q - - N K N - - - - - - G G S A H E R R D K Q P T L G E M T L E D L L L K A G V V T E T I P G S - - - - - - - - N H D G
Os004382_Os01t0    A A P K R N A E T G G G G G G G R R R R E R Q P T L G E V T L E D F L V K A G V V T Q - - - G S L K E L S D V G N V D -
 
AT3G56850.1     P V G G G S A G S G A G L G Q N I T Q V G P - - - W I - Q Y H Q - - - - - - - - - - - - - - - - - - - L P S - - M P Q P
Os004382_Os01t0    P V G R G V T A T G T - - - - - - V D L A P G S H W I E Q Y K Q Q I A S T D A H H H G Q Q G V Q G A Y F P N R L V P Q P
 
AT3G56850.1     Q A F M P Y P V - - - - - S D M Q A M V S Q S S L M G G L S D T Q T P G R K R V A S G E V V E K T V E R R Q K R M I K N
Os004382_Os01t0    L N V G P G A I L E P S Y S D G Q - - - T S S G M I G G M S D S Q T P G R K R G M S G D V A D K L M E R R Q K R M I K N
 
AT3G56850.1     R E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E R L R K Q K E V E K I L P S V P P P D P K R Q L R R T S S A
Os004382_Os01t0    R E S A A R S R A R K Q A Y T N E L E N K V S R L E E E N V R L K R Q K E L D E L I C A V P V P E P K Y Q L R R T S S A
 
AT3G56850.1     P F
Os004382_Os01t0    D F
 
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