fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022173 not found in 335aa AT3G56850.1 1st_1st 0.467625899 Ia
Os004382 not found in 340aa AT3G56850.1 not_1st 0.447841726 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G56850.1     ----MDSQR--------------GIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALG
Os022173_Os05t0 MIQAMASHAGGSGGGGGGSGRDAGSAQRGPMQGLARQGSLYGLTLNEVQSQL---GEPLL
Os004382_Os01t0 ----MGSQTMASKAGGGGVARRGG----GRMRSLGRQGSMYSLTLDEVQSQL---GEPLH
                    * *:               *    .  :.* **.*:*.***:***.:*   *:.* 

AT3G56850.1     SMNLDELLKSVCSVEANQPSSMAVNGGAAAQE---------GLSRQGSLTLPRDLSKKTV
Os022173_Os05t0 SMNLDELLKSVF------PDGADLDGGGGGGGIAGQSQPALGLQRQGSITMPPELSKKTV
Os004382_Os01t0 SMNLDELLRSVF------PDGLAIADGAGATTSSQQHQPGSGLLRQGSITMPPELSKKTV
                ********:**       *..  : .*...           ** ****:*:* :******

AT3G56850.1     DEVWKDIQQNKN--------GGSAHERRDKQPTLGEMTLEDLLLKAGVVT-------ETI
Os022173_Os05t0 DEVWKGIQDVPKRGAEE-----GGRWRRERQPTLGEMTLEDFLVKAGVVT-----DPNDL
Os004382_Os01t0 DEVWKGIQAAPKRNAETGGGGGGGRRRRERQPTLGEVTLEDFLVKAGVVTQGSLKELSDV
                *****.**   :          ..: **::******:****:*:******       . :

AT3G56850.1     PGSNHDGPV-GGGSAGSGAGLGQNITQVGPWI-QYHQL-----------PSM--------
Os022173_Os05t0 PG-NMD-VVGGAAAAAAGT---SDLNAGAQWLQQYHQQ--ALEPQH---PSIGAPYMATH
Os004382_Os01t0 -G-NVD-PV-GRGVTATGT---VDLAPGSHWIEQYKQQIASTDAHHHGQQGVQGAYFPNR
                 * * *  * * . :.:*:    ::   . *: **:*             .:        

AT3G56850.1     --PQPQAFMPYPV-----SDMQAMVSQSSLMGGLSDTQTPGRKRVASGEVVEKTVERRQK
Os022173_Os05t0 LAPQPLAVATGAVLDPIYSDGQ---ITSPMLGALSDPQTPGRKRCATGEIADKLVERRQK
Os004382_Os01t0 LVPQPLNVGPGAILEPSYSDGQ---TSSGMIGGMSDSQTPGRKRGMSGDVADKLMERRQK
                  ***  . . .:     ** *     * ::*.:**.*******  :*::.:* :*****

AT3G56850.1     RMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLR
Os022173_Os05t0 RMIKNRESAARSRARKQAYTNELENKVLRLEEENERLKKQKELDEILNSAPPPEPKYQLR
Os004382_Os01t0 RMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQKELDELICAVPVPEPKYQLR
                ********************:*** ** ****** **::***::::: :.* *:** ***

AT3G56850.1     RTSSAPF
Os022173_Os05t0 RTSSAAF
Os004382_Os01t0 RTSSADF
                ***** *
BoxShade v3.31 C (beta, 970507) Output
AT3G56850.1     - - - - M D S Q R - - - - - - - - - - - - - - G I V E Q A K S Q S L N R Q S S L Y S L T L D E V Q N H L G S S G K A L G
Os022173_Os05t0    M I Q A M A S H A G G S G G G G G G S G R D A G S A Q R G P M Q G L A R Q G S L Y G L T L N E V Q S Q L - - - G E P L L
Os004382_Os01t0    - - - - M G S Q T M A S K A G G G G V A R R G G - - - - G R M R S L G R Q G S M Y S L T L D E V Q S Q L - - - G E P L H
 
AT3G56850.1     S M N L D E L L K S V C S V E A N Q P S S M A V N G G A A A Q E - - - - - - - - - G L S R Q G S L T L P R D L S K K T V
Os022173_Os05t0    S M N L D E L L K S V F - - - - - - P D G A D L D G G G G G G G I A G Q S Q P A L G L Q R Q G S I T M P P E L S K K T V
Os004382_Os01t0    S M N L D E L L R S V F - - - - - - P D G L A I A D G A G A T T S S Q Q H Q P G S G L L R Q G S I T M P P E L S K K T V
 
AT3G56850.1     D E V W K D I Q Q N K N - - - - - - - - G G S A H E R R D K Q P T L G E M T L E D L L L K A G V V T - - - - - - - E T I
Os022173_Os05t0    D E V W K G I Q D V P K R G A E E - - - - - G G R W R R E R Q P T L G E M T L E D F L V K A G V V T - - - - - D P N D L
Os004382_Os01t0    D E V W K G I Q A A P K R N A E T G G G G G G G R R R R E R Q P T L G E V T L E D F L V K A G V V T Q G S L K E L S D V
 
AT3G56850.1     P G S N H D G P V - G G G S A G S G A G L G Q N I T Q V G P W I - Q Y H Q L - - - - - - - - - - - P S M - - - - - - - -
Os022173_Os05t0    P G - N M D - V V G G A A A A A A G T - - - S D L N A G A Q W L Q Q Y H Q Q - - A L E P Q H - - - P S I G A P Y M A T H
Os004382_Os01t0    - G - N V D - P V - G R G V T A T G T - - - V D L A P G S H W I E Q Y K Q Q I A S T D A H H H G Q Q G V Q G A Y F P N R
 
AT3G56850.1     - - P Q P Q A F M P Y P V - - - - - S D M Q A M V S Q S S L M G G L S D T Q T P G R K R V A S G E V V E K T V E R R Q K
Os022173_Os05t0    L A P Q P L A V A T G A V L D P I Y S D G Q - - - I T S P M L G A L S D P Q T P G R K R C A T G E I A D K L V E R R Q K
Os004382_Os01t0    L V P Q P L N V G P G A I L E P S Y S D G Q - - - T S S G M I G G M S D S Q T P G R K R G M S G D V A D K L M E R R Q K
 
AT3G56850.1     R M I K N R E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E R L R K Q K E V E K I L P S V P P P D P K R Q L R
Os022173_Os05t0    R M I K N R E S A A R S R A R K Q A Y T N E L E N K V L R L E E E N E R L K K Q K E L D E I L N S A P P P E P K Y Q L R
Os004382_Os01t0    R M I K N R E S A A R S R A R K Q A Y T N E L E N K V S R L E E E N V R L K R Q K E L D E L I C A V P V P E P K Y Q L R
 
AT3G56850.1     R T S S A P F
Os022173_Os05t0    R T S S A A F
Os004382_Os01t0    R T S S A D F
 
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