fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018840 not found in 324aa AT3G56850.1 1st_1st 0.473021582 Ia
Sb025986 not found in 376aa AT3G56850.1 not_1st 0.465827338 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G56850.1     -----MDSQR-------------GIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALG
Sb018840_Sorbi1 -----MSSQTGGGRG-----SDAGSVQRGQMQSLARQGSLYNLTLDEVQSHL---GEPLL
Sb025986_Sorbi1 MGSQTMASQAGGGGGGVGGSGGAGAAQRGQMQSLARQGSLYNLTLDEVQSHL---GEPLH
                     * **              * .::.: *** **.***.*******.**   *:.* 

AT3G56850.1     SMNLDELLKSVCSVEANQPSSMAVNGGAAAQ----EGLSRQGSLTLPRDLSKKTVDEVWK
Sb018840_Sorbi1 SMNFDELLKSVF------PDGVDPDGAVSGKPDPTSSLQRQGSIMMPLQLSKKTVDEVWK
Sb025986_Sorbi1 SMNLEELLKSVF------PDGLDPDGGTTSQYEQSSGLYRQGSITMPPELSKRTVDEVWK
                ***::******       *..:  :*..:.:    ..* ****: :* :***:*******

AT3G56850.1     DIQ---QNKNGGSAHERRDKQPTLGEMTLEDLLLKAGVVTETIPGSNHDGPVGGGSAGSG
Sb018840_Sorbi1 GIQGGPETSAAVDGRQRRERQPTLGEMTLEDFLVKAGVVTE-------------GHMKDS
Sb025986_Sorbi1 GIQDAPKRNVGEGGRRRRERQPTLGEMTLEDFLVKAGVVTE-------------GYLKDL
                .**   : . . ..:.**::***********:*:*******             *   . 

AT3G56850.1     AGLGQNITQVGP---------------WIQYHQ------------LPSMP---QPQAFMP
Sb018840_Sorbi1 ADLQSNVDTVGSSVVVAGASSLNPGAQWLQQYQQQALGSQ-----QPSLAGSYMASQLHP
Sb025986_Sorbi1 NDV-GNVEQVGS----AGAAGLTAGAHWLDHYQQRITAIEPHQHGQHSLPGAYMPGQLAL
                 .:  *:  **.               *:: :*              *:.    .  :  

AT3G56850.1     YPVSDMQAMVSQS---------SLMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKNR
Sb018840_Sorbi1 QPLSIATGAIMDSIYSDGQITSPSFGALSDPQTPGRKRGALGEVVDKVVERRQKRMIKNR
Sb025986_Sorbi1 QPLNVGPGAILES-YSDGHITSPMMGALSDSPTPGTKRGSPGDVADKLMERRQKRMIKNR
                 *:.   . : :*         . :*.***. *** ** : *:*.:* :***********

AT3G56850.1     ESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLRRTSSAP
Sb018840_Sorbi1 ESAARSRARKQAYTNELENKVSRLEEENERLKKQQELDEILSSAPPPEPKYQLRRTGSAA
Sb025986_Sorbi1 ESAARSRARKQAYTNELENKVSRLEEENEKLKKQKELEKILFSAPLPEPKYQLRRTGSAT
                **************:*** **********:*:**:*:::** *.* *:** *****.**.

AT3G56850.1     F
Sb018840_Sorbi1 F
Sb025986_Sorbi1 F
                *
BoxShade v3.31 C (beta, 970507) Output
AT3G56850.1     - - - - - M D S Q R - - - - - - - - - - - - - G I V E Q A K S Q S L N R Q S S L Y S L T L D E V Q N H L G S S G K A L G
Sb018840_Sorbi1    - - - - - M S S Q T G G G R G - - - - - S D A G S V Q R G Q M Q S L A R Q G S L Y N L T L D E V Q S H L - - - G E P L L
Sb025986_Sorbi1    M G S Q T M A S Q A G G G G G G V G G S G G A G A A Q R G Q M Q S L A R Q G S L Y N L T L D E V Q S H L - - - G E P L H
 
AT3G56850.1     S M N L D E L L K S V C S V E A N Q P S S M A V N G G A A A Q - - - - E G L S R Q G S L T L P R D L S K K T V D E V W K
Sb018840_Sorbi1    S M N F D E L L K S V F - - - - - - P D G V D P D G A V S G K P D P T S S L Q R Q G S I M M P L Q L S K K T V D E V W K
Sb025986_Sorbi1    S M N L E E L L K S V F - - - - - - P D G L D P D G G T T S Q Y E Q S S G L Y R Q G S I T M P P E L S K R T V D E V W K
 
AT3G56850.1     D I Q - - - Q N K N G G S A H E R R D K Q P T L G E M T L E D L L L K A G V V T E T I P G S N H D G P V G G G S A G S G
Sb018840_Sorbi1    G I Q G G P E T S A A V D G R Q R R E R Q P T L G E M T L E D F L V K A G V V T E - - - - - - - - - - - - - G H M K D S
Sb025986_Sorbi1    G I Q D A P K R N V G E G G R R R R E R Q P T L G E M T L E D F L V K A G V V T E - - - - - - - - - - - - - G Y L K D L
 
AT3G56850.1     A G L G Q N I T Q V G P - - - - - - - - - - - - - - - W I Q Y H Q - - - - - - - - - - - - L P S M P - - - Q P Q A F M P
Sb018840_Sorbi1    A D L Q S N V D T V G S S V V V A G A S S L N P G A Q W L Q Q Y Q Q Q A L G S Q - - - - - Q P S L A G S Y M A S Q L H P
Sb025986_Sorbi1    N D V - G N V E Q V G S - - - - A G A A G L T A G A H W L D H Y Q Q R I T A I E P H Q H G Q H S L P G A Y M P G Q L A L
 
AT3G56850.1     Y P V S D M Q A M V S Q S - - - - - - - - - S L M G G L S D T Q T P G R K R V A S G E V V E K T V E R R Q K R M I K N R
Sb018840_Sorbi1    Q P L S I A T G A I M D S I Y S D G Q I T S P S F G A L S D P Q T P G R K R G A L G E V V D K V V E R R Q K R M I K N R
Sb025986_Sorbi1    Q P L N V G P G A I L E S - Y S D G H I T S P M M G A L S D S P T P G T K R G S P G D V A D K L M E R R Q K R M I K N R
 
AT3G56850.1     E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E R L R K Q K E V E K I L P S V P P P D P K R Q L R R T S S A P
Sb018840_Sorbi1    E S A A R S R A R K Q A Y T N E L E N K V S R L E E E N E R L K K Q Q E L D E I L S S A P P P E P K Y Q L R R T G S A A
Sb025986_Sorbi1    E S A A R S R A R K Q A Y T N E L E N K V S R L E E E N E K L K K Q K E L E K I L F S A P L P E P K Y Q L R R T G S A T
 
AT3G56850.1     F
Sb018840_Sorbi1    F
Sb025986_Sorbi1    F
 
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