fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051885 not found in 304aa AT3G56850.1 1st_1st 0.544964028 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56850.1     MDSQRGIV--EQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEA
gm051885_Glyma1 MGSQGGTTQDQEPKTGSLTRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWTAES
                *.** * .  ::.*: **.**.***.********:**. **.************* :.*:

AT3G56850.1     NQPSSMAVNGGAAAQEG--LSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAHERRDKQ
gm051885_Glyma1 GTDAYMQ-HGGQVASAGSSLNPQGSLTLSGNLSKKTIDEVWRDMQQNKSVG-----KERQ
                .  : *  :** .*. *  *. ******. :*****:****:*:****. *     :::*

AT3G56850.1     PTLGEMTLEDLLLKAGVVTETIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLPS
gm051885_Glyma1 PTLGEMTLEDFLVKAGVATEPFP--NEDGAM----AMSGVDSQHNTSQHAHWMQY-QLTS
                **********:*:****.**.:*  *.**.:    * **..  :* :* . *:** **.*

AT3G56850.1     M---PQPQAFM-------PYPV---SDMQAMVSQ---SSLMGGLSDTQTPGRKRVASGEV
gm051885_Glyma1 VQQQPQQQQHQHQNQQNSPIPIVVNTVLDAGYSEALPSSLMGALSDSQTAGRKRDASGNV
                :   ** * .        * *:   : ::*  *:   *****.***:**.**** ***:*

AT3G56850.1     VEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSV
gm051885_Glyma1 VEKIVERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQNEIERALPSA
                *** **************************:*******:*********:*:*:*: ***.

AT3G56850.1     PPPDPKRQLRRTSSAPF
gm051885_Glyma1 PPPDPKHQLRRTSSAPL
                ******:*********:
BoxShade v3.31 C (beta, 970507) Output
AT3G56850.1     M D S Q R G I V - - E Q A K S Q S L N R Q S S L Y S L T L D E V Q N H L G S S G K A L G S M N L D E L L K S V C S V E A
gm051885_Glyma1    M G S Q G G T T Q D Q E P K T G S L T R Q G S L Y N L T L D E V Q N Q L G N L G K P L G S M N L D E L L K S V W T A E S
 
AT3G56850.1     N Q P S S M A V N G G A A A Q E G - - L S R Q G S L T L P R D L S K K T V D E V W K D I Q Q N K N G G S A H E R R D K Q
gm051885_Glyma1    G T D A Y M Q - H G G Q V A S A G S S L N P Q G S L T L S G N L S K K T I D E V W R D M Q Q N K S V G - - - - - K E R Q
 
AT3G56850.1     P T L G E M T L E D L L L K A G V V T E T I P G S N H D G P V G G G S A G S G A G L G Q N I T Q V G P W I Q Y H Q L P S
gm051885_Glyma1    P T L G E M T L E D F L V K A G V A T E P F P - - N E D G A M - - - - A M S G V D S Q H N T S Q H A H W M Q Y - Q L T S
 
AT3G56850.1     M - - - P Q P Q A F M - - - - - - - P Y P V - - - S D M Q A M V S Q - - - S S L M G G L S D T Q T P G R K R V A S G E V
gm051885_Glyma1    V Q Q Q P Q Q Q Q H Q H Q N Q Q N S P I P I V V N T V L D A G Y S E A L P S S L M G A L S D S Q T A G R K R D A S G N V
 
AT3G56850.1     V E K T V E R R Q K R M I K N R E S A A R S R A R K Q A Y T H E L E I K V S R L E E E N E R L R K Q K E V E K I L P S V
gm051885_Glyma1    V E K I V E R R Q K R M I K N R E S A A R S R A R K Q A Y T Q E L E I K V S Q L E E E N E R L R R Q N E I E R A L P S A
 
AT3G56850.1     P P P D P K R Q L R R T S S A P F
gm051885_Glyma1    P P P D P K H Q L R R T S S A P L
 
0