fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044168 not found in 264aa AT3G56970.1 1st_1st 0.390873015 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56970.1     -MCALVP-SFFTNFGWP--STNQYESYYGAGDNLNNGTFLELTVPQTYEVTHHQNS----
pt044168_POPTR_ MLEELSPISLFSTFGWPLEEAISHEQLY---------SFRDGETPESF--THFPPSQPDV
                 :  * * *:*:.****  .: .:*. *         :* :  .*:::  **.  *    

AT3G56970.1     --LGVSVSSEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIP
pt044168_POPTR_ RQLDRSTSFTAHSGSGDPSMAKKLNHNASERDRRKKINSLYSSLRSLLPAADQRKKLSIP
                  *. *.*  .:. ..:* :.*****************:*:***** ***:** ******

AT3G56970.1     ETVSKSLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPKAVA-SYLSTVSATR
pt044168_POPTR_ YTVSRVLVYIPKLQQQVERLIQRKEELLSKLSRQADDLTHQENQRKGTMYSSLSSVSASR
                 ***: * ***:*****:****:***:* ::* * *   ::::* *..  * **:***:*

AT3G56970.1     LGDNEVMVQVSSSKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERLFYTLHLQVENMD-
pt044168_POPTR_ LSDREVVIHISTNKLHRSSLSEILVNLEEAGLLLLNSSSFESFGGRVFYNLHLQA--MEG
                *.*.**::::*:.*:*. *:*::* .:** *::*:: ** .* * *:**.****.  *: 

AT3G56970.1     DYKINCEELSERMLYLYEKCENSFN------------
pt044168_POPTR_ TYTVECEALNERLVSLCEKRESLFPLNSSSPYSNCVF
                 *.::** *.**:: * ** *. *
BoxShade v3.31 C (beta, 970507) Output
AT3G56970.1     - M C A L V P - S F F T N F G W P - - S T N Q Y E S Y Y G A G D N L N N G T F L E L T V P Q T Y E V T H H Q N S - - - -
pt044168_POPTR_    M L E E L S P I S L F S T F G W P L E E A I S H E Q L Y - - - - - - - - - S F R D G E T P E S F - - T H F P P S Q P D V
 
AT3G56970.1     - - L G V S V S S E G N E I D N N P V V V K K L N H N A S E R D R R K K I N T L F S S L R S C L P A S D Q S K K L S I P
pt044168_POPTR_    R Q L D R S T S F T A H S G S G D P S M A K K L N H N A S E R D R R K K I N S L Y S S L R S L L P A A D Q R K K L S I P
 
AT3G56970.1     E T V S K S L K Y I P E L Q Q Q V K R L I Q K K E E I L V R V S G Q R D F E L Y D K Q Q P K A V A - S Y L S T V S A T R
pt044168_POPTR_    Y T V S R V L V Y I P K L Q Q Q V E R L I Q R K E E L L S K L S R Q A D D L T H Q E N Q R K G T M Y S S L S S V S A S R
 
AT3G56970.1     L G D N E V M V Q V S S S K I H N F S I S N V L G G I E E D G F V L V D V S S S R S Q G E R L F Y T L H L Q V E N M D -
pt044168_POPTR_    L S D R E V V I H I S T N K L H R S S L S E I L V N L E E A G L L L L N S S S F E S F G G R V F Y N L H L Q A - - M E G
 
AT3G56970.1     D Y K I N C E E L S E R M L Y L Y E K C E N S F N - - - - - - - - - - - -
pt044168_POPTR_    T Y T V E C E A L N E R L V S L C E K R E S L F P L N S S S P Y S N C V F
 
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