fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G56980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006912 not found in 241aa AT3G56980.1 1st_1st 0.292993630 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G56980.1     MCALV-PPLFPNFGWPSTGEYDSYYLAGDILNNGGFLDFPVPEETYGAVTAVTQHQNSFG
gm006912_Glyma0 MVALFSPPVFSTKGWFLEEEPLSYDVSS---------DYSFPYQFFAP-----QTQIELE
                * **. **:*.. **    *  ** ::.         *:..* : :..     * * .: 

AT3G56980.1     VSVSSEGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVS
gm006912_Glyma0 IERSSAPSPED--PAMVKKLSHNASERDRRKKVNDLVSSLRSLLPGPDQTKKMSIPATVS
                :. **  .  *  *.:****.*********:*:*.*.***** **...*:**:*******

AT3G56980.1     RSLKYIPELQEQVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYIS--TVSATRLGD
gm006912_Glyma0 RVLKYIPELQHQVQALTKKKEELLCRISKNLKGDSVNKESQRRISHHNSDFAVSTSRLND
                * ********.**: * ******* :** : : :.  *:. : :::: *  :**::**.*

AT3G56980.1     NEVMVQISSSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQVEKIENYKL
gm006912_Glyma0 CEAVVHISSYEAHKAPLSDILQCLENNGLYLLNASSSETFGGRVFYNLHFQVEK--THRL
                 *.:*:*** : *: .:*::*. **:: : *:: ***.: * *:**.**:****  .::*

AT3G56980.1     NCEELSQRMLYLYEECGNSYI-
gm006912_Glyma0 ESEILTEKLLSIYEK---QRIF
                :.* *::::* :**:   . *
BoxShade v3.31 C (beta, 970507) Output
AT3G56980.1     M C A L V - P P L F P N F G W P S T G E Y D S Y Y L A G D I L N N G G F L D F P V P E E T Y G A V T A V T Q H Q N S F G
gm006912_Glyma0    M V A L F S P P V F S T K G W F L E E E P L S Y D V S S - - - - - - - - - D Y S F P Y Q F F A P - - - - - Q T Q I E L E
 
AT3G56980.1     V S V S S E G N E I D N N P V V V K K L N H N A S E R D R R R K I N S L F S S L R S C L P A S G Q S K K L S I P A T V S
gm006912_Glyma0    I E R S S A P S P E D - - P A M V K K L S H N A S E R D R R K K V N D L V S S L R S L L P G P D Q T K K M S I P A T V S
 
AT3G56980.1     R S L K Y I P E L Q E Q V K K L I K K K E E L L V Q I S G Q R N T E C Y V K Q P P K A V A N Y I S - - T V S A T R L G D
gm006912_Glyma0    R V L K Y I P E L Q H Q V Q A L T K K K E E L L C R I S K N L K G D S V N K E S Q R R I S H H N S D F A V S T S R L N D
 
AT3G56980.1     N E V M V Q I S S S K I H N F S I S N V L S G L E E D R F V L V D M S S S R S Q G E R L F Y T L H L Q V E K I E N Y K L
gm006912_Glyma0    C E A V V H I S S Y E A H K A P L S D I L Q C L E N N G L Y L L N A S S S E T F G G R V F Y N L H F Q V E K - - T H R L
 
AT3G56980.1     N C E E L S Q R M L Y L Y E E C G N S Y I -
gm006912_Glyma0    E S E I L T E K L L S I Y E K - - - Q R I F
 
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