fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp036868 not found in 303aa AT2G41835.1 1st_not 0.437125748 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G57480.1     MGTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVIC
pp036868_Pp1s83 MGTPALPDLGQHCSRVDCHQLDFLPFTCDACHKVFCLEHRQYKSHNCPNTKDHDVTVIVC
                **** :****:***   *:*:******** * :*:**:**.* .*:**: :  ****::*

AT3G57480.1     PLCAKGVRLNPDEDPNITWEKHVNTDCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKCRD
pp036868_Pp1s83 PVCHKSIRTVANEDENVTWDRHVRTNCDPSNYEKATKKPRCPVRGCKEILVFSNKVLCND
                *:* *.:*  .:** *:**::**.*:*********.** :***  *:*:*.***.: *.*

AT3G57480.1     CSIDHCLKHRFGPDHSCSGPKKPE------SSFSFMGFLSTNTKEAP-------------
pp036868_Pp1s83 CKREVCLKHRFGLDHGCEDFRKANRSNWGISDYGNMFMKSFKERKAPVVQSNGNSKLPAN
                *. : ******* **.*.. :*.:      *.:. * : * : ::**             

AT3G57480.1     -ASSSSSSR----WSSLFASAEASISRL-----------GNDI-----SQKLQFASGNDG
pp036868_Pp1s83 GASSVQSGSIKGAFSGLFSSVEAGINKLGLATSSSGTSHGNAVGRQTPSEPLK---GSSG
                 *** .*.     :*.**:*.**.*.:*           ** :     *: *:   *..*

AT3G57480.1     NSEKTQE----RNGKQNCGKV--------------TVDVCPKCSRGFRDPVDLLKHIDKD
pp036868_Pp1s83 QASKTEECPQCRARFANVAQLIKHVETMHDTPNQEMLDECPKCGRKFRDPIQLVNHVERD
                ::.**:*    *    * .::               :* ****.* ****::*::*:::*

AT3G57480.1     HRGTSKA
pp036868_Pp1s83 HGGSSS-
                * *:*.
BoxShade v3.31 C (beta, 970507) Output
AT3G57480.1     M G T P E F P D L G K H C S V D Y C K Q I D F L P F T C D R C L Q V Y C L D H R S Y M K H D C P K G N R G D V T V V I C
pp036868_Pp1s83    M G T P A L P D L G Q H C S R V D C H Q L D F L P F T C D A C H K V F C L E H R Q Y K S H N C P N T K D H D V T V I V C
 
AT3G57480.1     P L C A K G V R L N P D E D P N I T W E K H V N T D C D P S N Y E K A V K K K K C P V P R C R E L L T F S N T I K C R D
pp036868_Pp1s83    P V C H K S I R T V A N E D E N V T W D R H V R T N C D P S N Y E K A T K K P R C P V R G C K E I L V F S N K V L C N D
 
AT3G57480.1     C S I D H C L K H R F G P D H S C S G P K K P E - - - - - - S S F S F M G F L S T N T K E A P - - - - - - - - - - - - -
pp036868_Pp1s83    C K R E V C L K H R F G L D H G C E D F R K A N R S N W G I S D Y G N M F M K S F K E R K A P V V Q S N G N S K L P A N
 
AT3G57480.1     - A S S S S S S R - - - - W S S L F A S A E A S I S R L - - - - - - - - - - - G N D I - - - - - S Q K L Q F A S G N D G
pp036868_Pp1s83    G A S S V Q S G S I K G A F S G L F S S V E A G I N K L G L A T S S S G T S H G N A V G R Q T P S E P L K - - - G S S G
 
AT3G57480.1     N S E K T Q E - - - - R N G K Q N C G K V - - - - - - - - - - - - - - T V D V C P K C S R G F R D P V D L L K H I D K D
pp036868_Pp1s83    Q A S K T E E C P Q C R A R F A N V A Q L I K H V E T M H D T P N Q E M L D E C P K C G R K F R D P I Q L V N H V E R D
 
AT3G57480.1     H R G T S K A
pp036868_Pp1s83    H G G S S S -
 
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