Input
| Putative repression domain
|
|
AT3G57480.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt006413 |
not found in 292aa |
AT2G41835.1 |
1st_not |
0.670658682 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G57480.1 MGTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVIC
pt006413_POPTR_ MGTPQFPDLGKHCSVEDCKQIDFLPFTCDRCRQVFCLEHRSYIKHSCPKADSNGVIVVIC
****:**********: ************** **:**:****:**.***.: ..* ****
AT3G57480.1 PLCAKGVRLNPDEDPNITWEKHVNTDCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKCRD
pt006413_POPTR_ PLCAKGVRLNPDEDPNISWEVHVNTECDPSNYDKVTKKRKCPVRGCRELLTFSNTIKCRD
*****************:** ****:******:*..**:**** ***************
AT3G57480.1 CSIDHCLKHRFGPDHSCSGPKKPESSFSFMGFLSTNTKEAP----ASSSSSSRWSSLF--
pt006413_POPTR_ CTLDHCLKHRFGPDHTCPGPKKPDVSFPFMGLLNRSKKEESKPNRATAVSSSKWTTNFLS
*::************:*.*****: **.***:*. ..** . *:: ***:*:: *
AT3G57480.1 ------ASAEASISRLGNDISQKLQFA-----------SGNDGNSE--------------
pt006413_POPTR_ AASTVRASAEAGMSKLSSEISQAWQTATNSASPSSSNGSGGMGPEECPQCGTRFSSVTNL
*****.:*:*..:*** * * **. * .*
AT3G57480.1 -----KTQERNGKQN-CGKVTVDVCPKCSRGFRDPVDLLKHIDKDHRGTSKA
pt006413_POPTR_ IDHVQKVHEKGGNQSRVLQLPMEVCPKCSKGFRDPVALVEHVERDHRGTSKA
*.:*:.*:*. ::.::******:****** *::*:::********
BoxShade v3.31 C (beta, 970507) Output
AT3G57480.1 |
M |
G |
T |
P |
E |
F |
P |
D |
L |
G |
K |
H |
C |
S |
V |
D |
Y |
C |
K |
Q |
I |
D |
F |
L |
P |
F |
T |
C |
D |
R |
C |
L |
Q |
V |
Y |
C |
L |
D |
H |
R |
S |
Y |
M |
K |
H |
D |
C |
P |
K |
G |
N |
R |
G |
D |
V |
T |
V |
V |
I |
C |
pt006413_POPTR_ |
M |
G |
T |
P |
Q |
F |
P |
D |
L |
G |
K |
H |
C |
S |
V |
E |
D |
C |
K |
Q |
I |
D |
F |
L |
P |
F |
T |
C |
D |
R |
C |
R |
Q |
V |
F |
C |
L |
E |
H |
R |
S |
Y |
I |
K |
H |
S |
C |
P |
K |
A |
D |
S |
N |
G |
V |
I |
V |
V |
I |
C |
|
AT3G57480.1 |
P |
L |
C |
A |
K |
G |
V |
R |
L |
N |
P |
D |
E |
D |
P |
N |
I |
T |
W |
E |
K |
H |
V |
N |
T |
D |
C |
D |
P |
S |
N |
Y |
E |
K |
A |
V |
K |
K |
K |
K |
C |
P |
V |
P |
R |
C |
R |
E |
L |
L |
T |
F |
S |
N |
T |
I |
K |
C |
R |
D |
pt006413_POPTR_ |
P |
L |
C |
A |
K |
G |
V |
R |
L |
N |
P |
D |
E |
D |
P |
N |
I |
S |
W |
E |
V |
H |
V |
N |
T |
E |
C |
D |
P |
S |
N |
Y |
D |
K |
V |
T |
K |
K |
R |
K |
C |
P |
V |
R |
G |
C |
R |
E |
L |
L |
T |
F |
S |
N |
T |
I |
K |
C |
R |
D |
|
AT3G57480.1 |
C |
S |
I |
D |
H |
C |
L |
K |
H |
R |
F |
G |
P |
D |
H |
S |
C |
S |
G |
P |
K |
K |
P |
E |
S |
S |
F |
S |
F |
M |
G |
F |
L |
S |
T |
N |
T |
K |
E |
A |
P |
- |
- |
- |
- |
A |
S |
S |
S |
S |
S |
S |
R |
W |
S |
S |
L |
F |
- |
- |
pt006413_POPTR_ |
C |
T |
L |
D |
H |
C |
L |
K |
H |
R |
F |
G |
P |
D |
H |
T |
C |
P |
G |
P |
K |
K |
P |
D |
V |
S |
F |
P |
F |
M |
G |
L |
L |
N |
R |
S |
K |
K |
E |
E |
S |
K |
P |
N |
R |
A |
T |
A |
V |
S |
S |
S |
K |
W |
T |
T |
N |
F |
L |
S |
|
AT3G57480.1 |
- |
- |
- |
- |
- |
- |
A |
S |
A |
E |
A |
S |
I |
S |
R |
L |
G |
N |
D |
I |
S |
Q |
K |
L |
Q |
F |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
G |
N |
D |
G |
N |
S |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt006413_POPTR_ |
A |
A |
S |
T |
V |
R |
A |
S |
A |
E |
A |
G |
M |
S |
K |
L |
S |
S |
E |
I |
S |
Q |
A |
W |
Q |
T |
A |
T |
N |
S |
A |
S |
P |
S |
S |
S |
N |
G |
S |
G |
G |
M |
G |
P |
E |
E |
C |
P |
Q |
C |
G |
T |
R |
F |
S |
S |
V |
T |
N |
L |
|
AT3G57480.1 |
- |
- |
- |
- |
- |
K |
T |
Q |
E |
R |
N |
G |
K |
Q |
N |
- |
C |
G |
K |
V |
T |
V |
D |
V |
C |
P |
K |
C |
S |
R |
G |
F |
R |
D |
P |
V |
D |
L |
L |
K |
H |
I |
D |
K |
D |
H |
R |
G |
T |
S |
K |
A |
pt006413_POPTR_ |
I |
D |
H |
V |
Q |
K |
V |
H |
E |
K |
G |
G |
N |
Q |
S |
R |
V |
L |
Q |
L |
P |
M |
E |
V |
C |
P |
K |
C |
S |
K |
G |
F |
R |
D |
P |
V |
A |
L |
V |
E |
H |
V |
E |
R |
D |
H |
R |
G |
T |
S |
K |
A |
|
|