fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006412 not found in 294aa AT2G41835.1 not_not 0.652694610 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G57480.1     MGTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVIC
pt006412_POPTR_ MGTPQFPDLGKHCSVEDCKQIDFLPFTCDRCRQVFCLEHRSYIKHSCPKADSNGVIVVIC
                ****:**********: ************** **:**:****:**.***.: ..* ****

AT3G57480.1     PLCAKGVRLNPDEDPNITWEKHVNTDCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKCRD
pt006412_POPTR_ PLCAKGVRLNPDEDPNISWEVHVNTECDPSNYDKVTKKRKCPVRGCRELLTFSNTIKCRD
                *****************:** ****:******:*..**:****  ***************

AT3G57480.1     CSIDHCLKHRFGPDHSCSGPKKPESSFSFMGFLSTNTKEAP----ASSSSSSRWSSLF--
pt006412_POPTR_ CTLDHCLKHRFGPDHTCPGPKKPDVSFPFMGLLNRSKKEESKPNRATAVSSSKWTTNFLS
                *::************:*.*****: **.***:*. ..** .    *:: ***:*:: *  

AT3G57480.1     ------ASAEASISRLGNDISQKLQFA-----------SGNDGNSE--------------
pt006412_POPTR_ AASTVRASAEAGMSKLSSEISQAWQTATNSASPSSSNGSGGMGPEECPQCGTRFSSVTNL
                      *****.:*:*..:***  * *           **. * .*              

AT3G57480.1     -----KTQERNGKQN-CGKVTVDVCPKCSRGFRDPVDLLKHIDKDHRGTSKA--
pt006412_POPTR_ IDHVQKVHEKGGNQSRVLQLPMEVCPKCSKGFRDPVALVEHVERDHRDNLVEPT
                     *.:*:.*:*.   ::.::******:****** *::*:::***..
BoxShade v3.31 C (beta, 970507) Output
AT3G57480.1     M G T P E F P D L G K H C S V D Y C K Q I D F L P F T C D R C L Q V Y C L D H R S Y M K H D C P K G N R G D V T V V I C
pt006412_POPTR_    M G T P Q F P D L G K H C S V E D C K Q I D F L P F T C D R C R Q V F C L E H R S Y I K H S C P K A D S N G V I V V I C
 
AT3G57480.1     P L C A K G V R L N P D E D P N I T W E K H V N T D C D P S N Y E K A V K K K K C P V P R C R E L L T F S N T I K C R D
pt006412_POPTR_    P L C A K G V R L N P D E D P N I S W E V H V N T E C D P S N Y D K V T K K R K C P V R G C R E L L T F S N T I K C R D
 
AT3G57480.1     C S I D H C L K H R F G P D H S C S G P K K P E S S F S F M G F L S T N T K E A P - - - - A S S S S S S R W S S L F - -
pt006412_POPTR_    C T L D H C L K H R F G P D H T C P G P K K P D V S F P F M G L L N R S K K E E S K P N R A T A V S S S K W T T N F L S
 
AT3G57480.1     - - - - - - A S A E A S I S R L G N D I S Q K L Q F A - - - - - - - - - - - S G N D G N S E - - - - - - - - - - - - - -
pt006412_POPTR_    A A S T V R A S A E A G M S K L S S E I S Q A W Q T A T N S A S P S S S N G S G G M G P E E C P Q C G T R F S S V T N L
 
AT3G57480.1     - - - - - K T Q E R N G K Q N - C G K V T V D V C P K C S R G F R D P V D L L K H I D K D H R G T S K A - -
pt006412_POPTR_    I D H V Q K V H E K G G N Q S R V L Q L P M E V C P K C S K G F R D P V A L V E H V E R D H R D N L V E P T
 
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