fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023963 not found in 427aa AT2G41835.1 1st_not 0.630738522 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G57480.1     ------------------------------------------------------------
Sb023963_Sorbi1 MLISCPVRLTTEPPPFSSSLPAAAAVAATTCHLRPCGRRRGAEAVLLGSPGVGARAARFG
                                                                            

AT3G57480.1     -MGTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVI
Sb023963_Sorbi1 GMGTPEFPDLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANMKDVTVLI
                 ***************. *:************ :*:**:**** .*:**:.*  ****:*

AT3G57480.1     CPLCAKGVRLNPDEDPNITWEKHVNTDCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKCR
Sb023963_Sorbi1 CPLCAKGVRLNPSEDPNITWDTHVNTDCDPSNYQKVTKKKKCPVPGCRETLTFSNTIRCK
                ************.*******:.***********:*..******** *** *******:*:

AT3G57480.1     DCSIDHCLKHRFGPDHSCSGPKKPESSFSFMGFLSTNTKEAPASSSS----SSRWSSLF-
Sb023963_Sorbi1 DCTKEHCLKHRFGPDHKCPGPRKVDSGFPFVSMLRRSQKAETRSNSSNNNGSSWWSSSLV
                **: :***********.*.**:* :*.*.*:.:*  . *  . *.**    ** *** : 

AT3G57480.1     -------ASAEASISRLGNDISQKLQFA----SGNDGNS---------------------
Sb023963_Sorbi1 NAATNFKSSAEAGMQKLSTVTSQAFQKAKDGMSPNSSSSSGDLVEQCVHCPARFSTVGAL
                       :****.:.:*..  ** :* *    * *...*                     

AT3G57480.1     ----EKTQERNGKQNCGKVTVDVCPKCSRGFRDPVDLLKHIDKDHRGTSKA
Sb023963_Sorbi1 IEHVEKSHQMNSQPSHGRVTIDVCPKCSKGFRDPVLLVEHVEREHGGTSRV
                    **::: *.: . *:**:*******:****** *::*::::* ***:.
BoxShade v3.31 C (beta, 970507) Output
AT3G57480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023963_Sorbi1    M L I S C P V R L T T E P P P F S S S L P A A A A V A A T T C H L R P C G R R R G A E A V L L G S P G V G A R A A R F G
 
AT3G57480.1     - M G T P E F P D L G K H C S V D Y C K Q I D F L P F T C D R C L Q V Y C L D H R S Y M K H D C P K G N R G D V T V V I
Sb023963_Sorbi1    G M G T P E F P D L G K H C S V G D C N Q I D F L P F T C D R C D H V F C L Q H R S Y T S H Q C P N A N M K D V T V L I
 
AT3G57480.1     C P L C A K G V R L N P D E D P N I T W E K H V N T D C D P S N Y E K A V K K K K C P V P R C R E L L T F S N T I K C R
Sb023963_Sorbi1    C P L C A K G V R L N P S E D P N I T W D T H V N T D C D P S N Y Q K V T K K K K C P V P G C R E T L T F S N T I R C K
 
AT3G57480.1     D C S I D H C L K H R F G P D H S C S G P K K P E S S F S F M G F L S T N T K E A P A S S S S - - - - S S R W S S L F -
Sb023963_Sorbi1    D C T K E H C L K H R F G P D H K C P G P R K V D S G F P F V S M L R R S Q K A E T R S N S S N N N G S S W W S S S L V
 
AT3G57480.1     - - - - - - - A S A E A S I S R L G N D I S Q K L Q F A - - - - S G N D G N S - - - - - - - - - - - - - - - - - - - - -
Sb023963_Sorbi1    N A A T N F K S S A E A G M Q K L S T V T S Q A F Q K A K D G M S P N S S S S S G D L V E Q C V H C P A R F S T V G A L
 
AT3G57480.1     - - - - E K T Q E R N G K Q N C G K V T V D V C P K C S R G F R D P V D L L K H I D K D H R G T S K A
Sb023963_Sorbi1    I E H V E K S H Q M N S Q P S H G R V T I D V C P K C S K G F R D P V L L V E H V E R E H G G T S R V
 
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