fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004407 not found in 281aa AT2G41835.1 1st_not 0.662674650 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G57480.1     MGTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVIC
gm004407_Glyma0 MGTPEFPDLGKHCAVSDCKLIDFLPFTCDRCDQVYCLEHRSYIKHLCTKADKQDVTVVIC
                *************:*. ** *********** *****:****:** *.*.:: *******

AT3G57480.1     PLCAKGVRLNPDEDPNITWEKHVNTDCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKCRD
gm004407_Glyma0 PLCAKGVRLVPDQDPNITWENHVNTECDPSNYEKVTKKKKCPVPGCREILVFSNTIKCRD
                ********* **:*******:****:********..******** ***:*.*********

AT3G57480.1     CSIDHCLKHRFGPDHSCSGPKKPESSFSFMGFLSTNTKEAP---ASSSSSSRWSSLF---
gm004407_Glyma0 CTVEHCLKHRFGPDHKCPGPKNVESSFSFMNLLNGSKKQESKPKSSATTSSKWSTSFLNA
                *:::***********.*.***: *******.:*. ..*: .   :*:::**:**: *   

AT3G57480.1     -----ASAEASISRLGNDISQKLQFASGNDGNS--------------------------E
gm004407_Glyma0 ASNIRASAEAGVSKL-----SAWQTARGGVGQSHSSGQVEQCPQCGAKFSSVTTLVDHVQ
                     *****.:*:*     .  * * *. *:*                          :

AT3G57480.1     KTQERNGKQNCGKVTVDVCPKCSRGFRDPVDLLKHIDKDHRGTSKA
gm004407_Glyma0 KVHERSGNRSGAKVTIDVCPKCSRGFRDPVALVEHVEKDHGGSSRS
                *.:**.*::. .***:************** *::*::*** *:*::
BoxShade v3.31 C (beta, 970507) Output
AT3G57480.1     M G T P E F P D L G K H C S V D Y C K Q I D F L P F T C D R C L Q V Y C L D H R S Y M K H D C P K G N R G D V T V V I C
gm004407_Glyma0    M G T P E F P D L G K H C A V S D C K L I D F L P F T C D R C D Q V Y C L E H R S Y I K H L C T K A D K Q D V T V V I C
 
AT3G57480.1     P L C A K G V R L N P D E D P N I T W E K H V N T D C D P S N Y E K A V K K K K C P V P R C R E L L T F S N T I K C R D
gm004407_Glyma0    P L C A K G V R L V P D Q D P N I T W E N H V N T E C D P S N Y E K V T K K K K C P V P G C R E I L V F S N T I K C R D
 
AT3G57480.1     C S I D H C L K H R F G P D H S C S G P K K P E S S F S F M G F L S T N T K E A P - - - A S S S S S S R W S S L F - - -
gm004407_Glyma0    C T V E H C L K H R F G P D H K C P G P K N V E S S F S F M N L L N G S K K Q E S K P K S S A T T S S K W S T S F L N A
 
AT3G57480.1     - - - - - A S A E A S I S R L G N D I S Q K L Q F A S G N D G N S - - - - - - - - - - - - - - - - - - - - - - - - - - E
gm004407_Glyma0    A S N I R A S A E A G V S K L - - - - - S A W Q T A R G G V G Q S H S S G Q V E Q C P Q C G A K F S S V T T L V D H V Q
 
AT3G57480.1     K T Q E R N G K Q N C G K V T V D V C P K C S R G F R D P V D L L K H I D K D H R G T S K A
gm004407_Glyma0    K V H E R S G N R S G A K V T I D V C P K C S R G F R D P V A L V E H V E K D H G G S S R S
 
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