fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006983 not found in 284aa AT3G57600.1 1st_1st 0.467710371 Ia
Pt043599 not found in 286aa AT3G57600.1 1st_1st 0.510763209 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G57600.1     ME--KSSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFA
gm006983_Glyma0 MDTCKKFPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFA
pt043599_POPTR_ MENCRRSPLKPWKKGPTRGKGGPQNAMCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFA
                *:  :  .:* *****:********* *:**********************:********

AT3G57600.1     TAEEAAMAYDEAALKLYGHDAYLNLPHLQ-RNTRPSLSNSQRFKWVPSRKFISMFPSCGM
gm006983_Glyma0 TAEEAAMAYDEAARRLYGPDAYLNLPHLQPRSTSTTITSSGKFKWFPSKNFISMFPSCGL
pt043599_POPTR_ TAEEAAMAYDEAARRLYGPDAYLNLPHLQ--SNFNPLNKSQKLKWIPSKNFISMFPSCGL
                ************* :*** **********  ..  .:..* ::**.**::*********:

AT3G57600.1     LNVNAQPSVHIIQQRLEELKKTGLLSQS-YSSSSSSTESKTNTSFL-----------DEK
gm006983_Glyma0 LNVNAQPSVHLIHQRLQELKRNSVVSQS---PPNSSNEPKEETQTVGSKKDGEN---PPK
pt043599_POPTR_ LNIHAQPSVHVIHQRLEELKNNRPLHQSSVASSSSSSESRNEVMIVSDENHVANLAVAEK
                **::******:*:***:***..  : **   ...**.*.: :.  :             *

AT3G57600.1     TSKGETDNMFEGGDQKKPEIDLTEFLQQLGILKDENEAEPSEVA-ECHSPPPWNEQEETG
gm006983_Glyma0 DDQMLSEE-VLGDLQEKPQIDLHEFLQQMGILKEERESERTDSSGSSSTMPEALLRDDND
pt043599_POPTR_ DVEISSEKMLLRNHDEKPQIDLNEFLQQLGILKEEKQPDSNDVE-ECLTVPESSQKYENE
                  :  ::: .  . ::**:*** *****:****:*.:.: .:   .. : *    : :. 

AT3G57600.1     ---SPFRTENFSWDTLIEMPRSETTTMQFDSSNFGSYDFEDDVSFP-SIWDYYGSLD
gm006983_Glyma0 HHLGVFSDNSVNWEALIDM-HGIAGIQESEVTQLEAYDPNDDLTFSTSIWNF-----
pt043599_POPTR_ --LAALADKSFNWDSLIEM-HGITDHQAAELNSFPVYDVQDEPAFPTSIWNF-----
                   . :  :...*::**:* :. :     : ..:  ** :*: :*. ***::
BoxShade v3.31 C (beta, 970507) Output
AT3G57600.1     M E - - K S S S M K Q W K K G P A R G K G G P Q N A L C Q Y R G V R Q R T W G K W V A E I R E P K K R A R L W L G S F A
gm006983_Glyma0    M D T C K K F P L K P W K K G P T R G K G G P Q N A S C E Y R G V R Q R T W G K W V A E I R E P K K R T R L W L G S F A
pt043599_POPTR_    M E N C R R S P L K P W K K G P T R G K G G P Q N A M C E Y R G V R Q R T W G K W V A E I R E P K K R T R L W L G S F A
 
AT3G57600.1     T A E E A A M A Y D E A A L K L Y G H D A Y L N L P H L Q - R N T R P S L S N S Q R F K W V P S R K F I S M F P S C G M
gm006983_Glyma0    T A E E A A M A Y D E A A R R L Y G P D A Y L N L P H L Q P R S T S T T I T S S G K F K W F P S K N F I S M F P S C G L
pt043599_POPTR_    T A E E A A M A Y D E A A R R L Y G P D A Y L N L P H L Q - - S N F N P L N K S Q K L K W I P S K N F I S M F P S C G L
 
AT3G57600.1     L N V N A Q P S V H I I Q Q R L E E L K K T G L L S Q S - Y S S S S S S T E S K T N T S F L - - - - - - - - - - - D E K
gm006983_Glyma0    L N V N A Q P S V H L I H Q R L Q E L K R N S V V S Q S - - - P P N S S N E P K E E T Q T V G S K K D G E N - - - P P K
pt043599_POPTR_    L N I H A Q P S V H V I H Q R L E E L K N N R P L H Q S S V A S S S S S S E S R N E V M I V S D E N H V A N L A V A E K
 
AT3G57600.1     T S K G E T D N M F E G G D Q K K P E I D L T E F L Q Q L G I L K D E N E A E P S E V A - E C H S P P P W N E Q E E T G
gm006983_Glyma0    D D Q M L S E E - V L G D L Q E K P Q I D L H E F L Q Q M G I L K E E R E S E R T D S S G S S S T M P E A L L R D D N D
pt043599_POPTR_    D V E I S S E K M L L R N H D E K P Q I D L N E F L Q Q L G I L K E E K Q P D S N D V E - E C L T V P E S S Q K Y E N E
 
AT3G57600.1     - - - S P F R T E N F S W D T L I E M P R S E T T T M Q F D S S N F G S Y D F E D D V S F P - S I W D Y Y G S L D
gm006983_Glyma0    H H L G V F S D N S V N W E A L I D M - H G I A G I Q E S E V T Q L E A Y D P N D D L T F S T S I W N F - - - - -
pt043599_POPTR_    - - L A A L A D K S F N W D S L I E M - H G I T D H Q A A E L N S F P V Y D V Q D E P A F P T S I W N F - - - - -
 
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