fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp006993 not found in 403aa AT3G57600.1 1st_1st 0.221135029 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G57600.1     ------------------------------------------------------------
pp006993_Pp1s16 MTVSGRTLQAERGRGEVVITVAKSKVSGVVNSANIGISSNFPSAHWEAIATKTIQRIGMQ
                                                                            

AT3G57600.1     ---------------MEKSSSM--KQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEI
pp006993_Pp1s16 LGSGGDDKLSPTSGHIEKPARKPGKRWKKGAMKGKGGPENAACEFRGVRQRTWGKWVAEI
                               :**.:    *:****. :*****:** *::***************

AT3G57600.1     REPKKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHLQRNTRPSLSNSQRFKWV
pp006993_Pp1s16 REPKKRARLWLGSFSTAREAALAYDIAARKLYGSMAELNLPPSESAGIDSVPSS-----T
                **************:**.***:*** ** ****  * ****  :     *:..*     .

AT3G57600.1     PSRKFISMFPSCGMLNVNAQPSVHIIQQRLEELKKTGLLSQSYSSSSSST-------ESK
pp006993_Pp1s16 PTKE--SSSPPRVMHDVE-------ITEHLELPRQHSLGTSASAGSSSRTSMHIGIREDH
                *:::  *  *.  * :*:       * ::**  :: .* :.: :.*** *       *.:

AT3G57600.1     TNTSFL--DEKTSKGETD--------------NMFEGG------------DQKKPEIDL-
pp006993_Pp1s16 FDVELVMADSGRAFGASDARQVFPHEMVRDSRGMGEAGPSLEMGTDSSSSSQVNPPHELF
                 :..::  *.  : * :*              .* *.*            .* :*  :* 

AT3G57600.1     ---TEFLQQ-------------------------LGILKDENE---------AEPSEVAE
pp006993_Pp1s16 SITPEFQQHRYYNLQGSRLGTSLSGEYLKDIESFLNRMDDDDDYALGSNSSLSQSTESAG
                   .** *:                         *. :.*:::         ::.:* * 

AT3G57600.1     CHSPP-PWNEQEETGSPF-RTENFSWDTLIEMPRSETTTMQFDSSNFGSYDFEDDV--SF
pp006993_Pp1s16 GSYPPDPHWDDENLGTQFLNSELESLDSVLNEP--------LVPENVELWDTRDTLPPSD
                   ** *  ::*: *: * .:*  * *:::: *        : ..*.  :* .* :  * 

AT3G57600.1     PSIWDYYGSLD
pp006993_Pp1s16 PSTWQ------
                ** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G57600.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp006993_Pp1s16    M T V S G R T L Q A E R G R G E V V I T V A K S K V S G V V N S A N I G I S S N F P S A H W E A I A T K T I Q R I G M Q
 
AT3G57600.1     - - - - - - - - - - - - - - - M E K S S S M - - K Q W K K G P A R G K G G P Q N A L C Q Y R G V R Q R T W G K W V A E I
pp006993_Pp1s16    L G S G G D D K L S P T S G H I E K P A R K P G K R W K K G A M K G K G G P E N A A C E F R G V R Q R T W G K W V A E I
 
AT3G57600.1     R E P K K R A R L W L G S F A T A E E A A M A Y D E A A L K L Y G H D A Y L N L P H L Q R N T R P S L S N S Q R F K W V
pp006993_Pp1s16    R E P K K R A R L W L G S F S T A R E A A L A Y D I A A R K L Y G S M A E L N L P P S E S A G I D S V P S S - - - - - T
 
AT3G57600.1     P S R K F I S M F P S C G M L N V N A Q P S V H I I Q Q R L E E L K K T G L L S Q S Y S S S S S S T - - - - - - - E S K
pp006993_Pp1s16    P T K E - - S S S P P R V M H D V E - - - - - - - I T E H L E L P R Q H S L G T S A S A G S S S R T S M H I G I R E D H
 
AT3G57600.1     T N T S F L - - D E K T S K G E T D - - - - - - - - - - - - - - N M F E G G - - - - - - - - - - - - D Q K K P E I D L -
pp006993_Pp1s16    F D V E L V M A D S G R A F G A S D A R Q V F P H E M V R D S R G M G E A G P S L E M G T D S S S S S Q V N P P H E L F
 
AT3G57600.1     - - - T E F L Q Q - - - - - - - - - - - - - - - - - - - - - - - - - L G I L K D E N E - - - - - - - - - A E P S E V A E
pp006993_Pp1s16    S I T P E F Q Q H R Y Y N L Q G S R L G T S L S G E Y L K D I E S F L N R M D D D D D Y A L G S N S S L S Q S T E S A G
 
AT3G57600.1     C H S P P - P W N E Q E E T G S P F - R T E N F S W D T L I E M P R S E T T T M Q F D S S N F G S Y D F E D D V - - S F
pp006993_Pp1s16    G S Y P P D P H W D D E N L G T Q F L N S E L E S L D S V L N E P - - - - - - - - L V P E N V E L W D T R D T L P P S D
 
AT3G57600.1     P S I W D Y Y G S L D
pp006993_Pp1s16    P S T W Q - - - - - -
 
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