fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006348 not found in 286aa AT3G57600.1 not_1st 0.493150684 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G57600.1     MEK--SSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFA
pt006348_POPTR_ MENCGKSPLKPWKKGPTRGKGGPQNAMCDYRGVRQRTWGKWVAEIREPKKRARLWLGSFA
                **:  .*.:* *****:*********:*:*******************************

AT3G57600.1     TAEEAAMAYDEAALKLYGHDAYLNLPHLQRNTRPSLSNSQRFKWVPSRKFISMFPSCGML
pt006348_POPTR_ TAEEAAMAYDEAARRLYGPNAYLNLPHLQSNSSPP-NKSHKFKWIPSNNFISMFPSCGLL
                ************* :*** :********* *: *. .:*::***:**.:*********:*

AT3G57600.1     NVNAQPSVHIIQQRLEELKKTGLLSQ-SYSSSSSSTESKTNTSFLD-----------EKT
pt006348_POPTR_ NIHAQPSVHVIHQRLQELKNNRPLNQSSVASSSSSSESRTEVMIVSDENHVANVSAAEKD
                *::******:*:***:***:.  *.* * :*****:**:*:. ::.           ** 

AT3G57600.1     SKGETDNMFEGGDQKKPEIDLTEFLQQLGILKDENEAEPSEVAECHSPPPWNEQEETG-S
pt006348_POPTR_ EEISSEKMLLTNHDEKPQIDLNEFLQQLGILKEENQPDNNDVDEHFTEPESSHKDQNELT
                .: .:::*:  ..::**:***.**********:**:.: .:* * .: *  ..:::.  :

AT3G57600.1     PFRTENFSWDTLIEMPR-SETTTMQFDSSNFGSYDFEDDVSFP-SIWDYYGSLD
pt006348_POPTR_ ALADKSFDWDSLIEMHGIADHQGEEFNS--FPVYDIQKELAFPTSIWNF-----
                .:  :.*.**:****   ::    :*:*  *  **::.:::** ***::
BoxShade v3.31 C (beta, 970507) Output
AT3G57600.1     M E K - - S S S M K Q W K K G P A R G K G G P Q N A L C Q Y R G V R Q R T W G K W V A E I R E P K K R A R L W L G S F A
pt006348_POPTR_    M E N C G K S P L K P W K K G P T R G K G G P Q N A M C D Y R G V R Q R T W G K W V A E I R E P K K R A R L W L G S F A
 
AT3G57600.1     T A E E A A M A Y D E A A L K L Y G H D A Y L N L P H L Q R N T R P S L S N S Q R F K W V P S R K F I S M F P S C G M L
pt006348_POPTR_    T A E E A A M A Y D E A A R R L Y G P N A Y L N L P H L Q S N S S P P - N K S H K F K W I P S N N F I S M F P S C G L L
 
AT3G57600.1     N V N A Q P S V H I I Q Q R L E E L K K T G L L S Q - S Y S S S S S S T E S K T N T S F L D - - - - - - - - - - - E K T
pt006348_POPTR_    N I H A Q P S V H V I H Q R L Q E L K N N R P L N Q S S V A S S S S S S E S R T E V M I V S D E N H V A N V S A A E K D
 
AT3G57600.1     S K G E T D N M F E G G D Q K K P E I D L T E F L Q Q L G I L K D E N E A E P S E V A E C H S P P P W N E Q E E T G - S
pt006348_POPTR_    E E I S S E K M L L T N H D E K P Q I D L N E F L Q Q L G I L K E E N Q P D N N D V D E H F T E P E S S H K D Q N E L T
 
AT3G57600.1     P F R T E N F S W D T L I E M P R - S E T T T M Q F D S S N F G S Y D F E D D V S F P - S I W D Y Y G S L D
pt006348_POPTR_    A L A D K S F D W D S L I E M H G I A D H Q G E E F N S - - F P V Y D I Q K E L A F P T S I W N F - - - - -
 
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