fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052066 not found in 282aa AT3G57600.1 not_1st 0.455968688 II
Gm004395 not found in 283aa AT3G57600.1 not_1st 0.440313111 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G57600.1     ME--KSSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFA
gm052066_Glyma1 MDTCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFA
gm004395_Glyma0 -----MFPPKPWKKGPTRGKGGPQNSSCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFA
                       . * *****:********: *:**********************:********

AT3G57600.1     TAEEAAMAYDEAALKLYGHDAYLNLPH--LQR---NTRPSLSNSQRFKWVPSRKFISMFP
gm052066_Glyma1 TAEEAAMAYDEAARRLYGPDAYLNLPH--LQP----RSTSTITSGKFKWFPSKNFISMFP
gm004395_Glyma0 TAEEAALAYDEAARRLYGPDAYLNLPHMMMQPTIFTNSTATKSHKYFKWFPSKNFISMFP
                ******:****** :*** ********  :*       .:  .   ***.**::******

AT3G57600.1     S-CGMLNVNAQPSVHIIQQRLEELKKTGLLSQSYSSSSSSTESKTNTSFLDEKTSKGETD
gm052066_Glyma1 S-CGLLNVNAQPSVHLIHQRLQELKRNSVVSQ--SSSSSSNDPKAEIQNVDSK-NHGEDE
gm004395_Glyma0 SRGGLLNLNAQPSVHVIHQKLQELKQNGVV---------------DLENFDIQ-NHAEIL
                *  *:**:*******:*:*:*:***:..::               : . .* : .:.*  

AT3G57600.1     NMFEGGD-------------QKKPEIDLTEFLQQLGILKDENEAEPS-------EVAECH
gm052066_Glyma1 NPPKDVQ---TSSEEVLGDLQEKPQIDLHEFLQQMGILKEERQSERTDSSGSS-TVREAV
gm004395_Glyma0 PPLQEGNSRVSSQKTIVGDFEEKPQIDLLEFLQQMGILKEEREEEKTNSSGSSTTVSEAA
                   :  :             ::**:*** *****:****:*.: * :        * *. 

AT3G57600.1     SPPPWNEQEETGSPFRT-ENFSWDTLIEMP----------RSETTTMQFDSSNFGSYDFE
gm052066_Glyma1 LT---DD-CDHLGVFSD-KSVNWEALIEM----HGLAG--IQESEVTQLE-----AYEPN
gm004395_Glyma0 SR---DESSEQAGVFSDMSSVNWEELIEMHEHDHGVADSFYRASEEIQFE-----AYDIN
                     ::  :  . *   ....*: ****              :   *::     :*: :

AT3G57600.1     DDVSF-PSIWDYYGSLD
gm052066_Glyma1 DDLTFSTSIWNF-----
gm004395_Glyma0 EDLTFSPSIWNY-----
                :*::* .***::
BoxShade v3.31 C (beta, 970507) Output
AT3G57600.1     M E - - K S S S M K Q W K K G P A R G K G G P Q N A L C Q Y R G V R Q R T W G K W V A E I R E P K K R A R L W L G S F A
gm052066_Glyma1    M D T C K K S P L K P W K K G P T R G K G G P Q N A S C E Y R G V R Q R T W G K W V A E I R E P K K R T R L W L G S F A
gm004395_Glyma0    - - - - - M F P P K P W K K G P T R G K G G P Q N S S C E Y R G V R Q R T W G K W V A E I R E P K K R T R L W L G S F A
 
AT3G57600.1     T A E E A A M A Y D E A A L K L Y G H D A Y L N L P H - - L Q R - - - N T R P S L S N S Q R F K W V P S R K F I S M F P
gm052066_Glyma1    T A E E A A M A Y D E A A R R L Y G P D A Y L N L P H - - L Q P - - - - R S T S T I T S G K F K W F P S K N F I S M F P
gm004395_Glyma0    T A E E A A L A Y D E A A R R L Y G P D A Y L N L P H M M M Q P T I F T N S T A T K S H K Y F K W F P S K N F I S M F P
 
AT3G57600.1     S - C G M L N V N A Q P S V H I I Q Q R L E E L K K T G L L S Q S Y S S S S S S T E S K T N T S F L D E K T S K G E T D
gm052066_Glyma1    S - C G L L N V N A Q P S V H L I H Q R L Q E L K R N S V V S Q - - S S S S S S N D P K A E I Q N V D S K - N H G E D E
gm004395_Glyma0    S R G G L L N L N A Q P S V H V I H Q K L Q E L K Q N G V V - - - - - - - - - - - - - - - D L E N F D I Q - N H A E I L
 
AT3G57600.1     N M F E G G D - - - - - - - - - - - - - Q K K P E I D L T E F L Q Q L G I L K D E N E A E P S - - - - - - - E V A E C H
gm052066_Glyma1    N P P K D V Q - - - T S S E E V L G D L Q E K P Q I D L H E F L Q Q M G I L K E E R Q S E R T D S S G S S - T V R E A V
gm004395_Glyma0    P P L Q E G N S R V S S Q K T I V G D F E E K P Q I D L L E F L Q Q M G I L K E E R E E E K T N S S G S S T T V S E A A
 
AT3G57600.1     S P P P W N E Q E E T G S P F R T - E N F S W D T L I E M P - - - - - - - - - - R S E T T T M Q F D S S N F G S Y D F E
gm052066_Glyma1    L T - - - D D - C D H L G V F S D - K S V N W E A L I E M - - - - H G L A G - - I Q E S E V T Q L E - - - - - A Y E P N
gm004395_Glyma0    S R - - - D E S S E Q A G V F S D M S S V N W E E L I E M H E H D H G V A D S F Y R A S E E I Q F E - - - - - A Y D I N
 
AT3G57600.1     D D V S F - P S I W D Y Y G S L D
gm052066_Glyma1    D D L T F S T S I W N F - - - - -
gm004395_Glyma0    E D L T F S P S I W N Y - - - - -
 
0