fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G57670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006991 not found in 358aa AT3G57670.1 1st_1st 0.752293577 Ia

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G57670.1     MTDPYSNFFTD---WFKSNPFHHYPNSSTNPSPH----------PLPPVTPPSSFFFFPQ
gm006991_Glyma0 MADPYSNFFSSSSPLFRFNHNQYFP--SSNPSPQHHNHNFINHTKTNDTTTTTAFFHYHQ
                *:*******:.    *: *  :::*  *:****:              .*..::**.: *

AT3G57670.1     SGDLRRPPPPPTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHH
gm006991_Glyma0 H---QTTTAFSSFPPSPPLREELPLLKLSPT--KQDEEEVED-LVSNCTGGAMDVEERIH
                    : ... .: ******** ****.***:  :**... .* *:.: .. :***:   *

AT3G57670.1     HQDDHHNLDDDDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLD
gm006991_Glyma0 LKEELEDDEDGSTSVTVALHIGLPSPSAAEMASVL----SSSSHEIT----------DKD
                 ::: .: :*.. .************** ****:*    **** . *          * *

AT3G57670.1     HEYSHGAVGGGEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFN
gm006991_Glyma0 QHGDHGAA-----EDSSSAG-------FRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFN
                :. .***.     :*..*.*        *************************** ****

AT3G57670.1     RYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRT
gm006991_Glyma0 RYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRT
                ************************************************************

AT3G57670.1     LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKA
gm006991_Glyma0 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKA
                ************************************************************

AT3G57670.1     FGNGHGAYGIDGFDEEDEPASEVEQLDNDHESMQSK
gm006991_Glyma0 FGSGHAAYGIDGFEEEDEPASEVEQ-DND-DSTQ--
                **.**.*******:*********** *** :* *  


BoxShade v3.31 C (beta, 970507) Output
AT3G57670.1     M T D P Y S N F F T D - - - W F K S N P F H H Y P N S S T N P S P H - - - - - - - - - - P L P P V T P P S S F F F F P Q
gm006991_Glyma0    M A D P Y S N F F S S S S P L F R F N H N Q Y F P - - S S N P S P Q H H N H N F I N H T K T N D T T T T T A F F H Y H Q
 
AT3G57670.1     S G D L R R P P P P P T P P P S P P L R E A L P L L S L S P A N K Q Q D H H H N H D H L I Q E P P S T S M D V D Y D H H
gm006991_Glyma0    H - - - Q T T T A F S S F P P S P P L R E E L P L L K L S P T - - K Q D E E E V E D - L V S N C T G G A M D V E E R I H
 
AT3G57670.1     H Q D D H H N L D D D D H D V T V A L H I G L P S P S A Q E M A S L L M M S S S S S S S R T T H H H E D M N H K K D L D
gm006991_Glyma0    L K E E L E D D E D G S T S V T V A L H I G L P S P S A A E M A S V L - - - - S S S S H E I T - - - - - - - - - - D K D
 
AT3G57670.1     H E Y S H G A V G G G E D D D E D S V G G D G G C R I S R L N K G Q Y W I P T P S Q I L I G P T Q F S C P V C F K T F N
gm006991_Glyma0    Q H G D H G A A - - - - - E D S S S A G - - - - - - - F R L N K G Q Y W I P T P S Q I L I G P T Q F S C P V C C K T F N
 
AT3G57670.1     R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T G M L R L P C Y C C A P G C R N N I D H P R A K P L K D F R T
gm006991_Glyma0    R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T G M L R L P C Y C C A P G C R N N I D H P R A K P L K D F R T
 
AT3G57670.1     L Q T H Y K R K H G I K P F M C R K C G K A F A V R G D W R T H E K N C G K L W Y C I C G S D F K H K R S L K D H I K A
gm006991_Glyma0    L Q T H Y K R K H G I K P F M C R K C G K A F A V R G D W R T H E K N C G K L W Y C I C G S D F K H K R S L K D H I K A
 
AT3G57670.1     F G N G H G A Y G I D G F D E E D E P A S E V E Q L D N D H E S M Q S K
gm006991_Glyma0    F G S G H A A Y G I D G F E E E D E P A S E V E Q - D N D - D S T Q - -
 
0