Input
| Putative repression domain
|
|
AT3G58070.1 |
VQDHVSLDLHL at 247/253 in AT3G58070.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm052163 |
SSVNDHLSLDLHL in 228/235 |
AT3G58070.1 |
1st_1st |
0.316008316 |
Ib |
Pt007625 |
AQDHVSLDLHL in 210/215 |
AT3G58070.1 |
1st_1st |
0.336798336 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT3G58070.1 MDEATGETETQDFMNVESFSQLPFIRRPKDKNPKPIRVFGKDF----TGRDFSITTGQED
gm052163_Glyma1 MDN-TTERETHDFMNVHSFSQLPFLRPAPPSKDKAIRLFGHEFIDAPTSNTFMISNNNV-
pt007625_POPTR_ MDK--VERETHDFMNVESFSQLPFIRPA-PVKEKGIRLFGIEF-----------GSNND-
**: * **:*****.*******:* . : * **:** :* ..:
AT3G58070.1 YTDPYQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRE
gm052163_Glyma1 ------SPSQHNNTNKDVNNNNV-ENNGAESSRRFECHYCCRNFPTSQALGGHQNAHKRE
pt007625_POPTR_ ------SPAADESESAETNEDTVKESESSDNNRRFECHYCCRNFPTSQALGGHQNAHKRE
: .:. . : . :. :.:. . .******** *******************
AT3G58070.1 RQLAKR-GVSSYFYHPDNNPYSYRHYPSWTNGPLTAARSYGGFSSGPKPSGYYTRPSYGS
gm052163_Glyma1 RQHAKR-HLQSTL-ISDANAYSFMNYSSNSSSAMI-GRFYGNSYSHQQ-----LQPINGS
pt007625_POPTR_ RQHAKRAHLQ-----IDSTPSSAMTYPSWNSHSNT-SRFYGSHGSYSQ------QPINGS
** *** :. * .. * *.* .. . .* **. * : :* **
AT3G58070.1 QLGLWRLPPRVQGVYNSNAAFTSNGSSSSSN------STLPLLTRSQTQLSSQVGGSAAQ
gm052163_Glyma1 PLGSWRIPT---------AATTAHAQSNPIFNRECSLHPLPLFSGEEMVNARMGF-SGSQ
pt007625_POPTR_ PLGLWRIPAV-------HGGGTFHHSDRSMH------HPLPLFAGEELKPSPAGTGSSSQ
** **:*. .. * : .. . .***:: .: : *.:*
AT3G58070.1 NRMSSYG-YGLSPNVQDHVSLDLHL
gm052163_Glyma1 NR---FGNYDPKSSVNDHLSLDLHL
pt007625_POPTR_ GR---YG-YDSKPSAQDHVSLDLHL
.* :* *. ....:**:******
BoxShade v3.31 C (beta, 970507) Output
AT3G58070.1 |
M |
D |
E |
A |
T |
G |
E |
T |
E |
T |
Q |
D |
F |
M |
N |
V |
E |
S |
F |
S |
Q |
L |
P |
F |
I |
R |
R |
P |
K |
D |
K |
N |
P |
K |
P |
I |
R |
V |
F |
G |
K |
D |
F |
- |
- |
- |
- |
T |
G |
R |
D |
F |
S |
I |
T |
T |
G |
Q |
E |
D |
gm052163_Glyma1 |
M |
D |
N |
- |
T |
T |
E |
R |
E |
T |
H |
D |
F |
M |
N |
V |
H |
S |
F |
S |
Q |
L |
P |
F |
L |
R |
P |
A |
P |
P |
S |
K |
D |
K |
A |
I |
R |
L |
F |
G |
H |
E |
F |
I |
D |
A |
P |
T |
S |
N |
T |
F |
M |
I |
S |
N |
N |
N |
V |
- |
pt007625_POPTR_ |
M |
D |
K |
- |
- |
V |
E |
R |
E |
T |
H |
D |
F |
M |
N |
V |
E |
S |
F |
S |
Q |
L |
P |
F |
I |
R |
P |
A |
- |
P |
V |
K |
E |
K |
G |
I |
R |
L |
F |
G |
I |
E |
F |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
S |
N |
N |
D |
- |
|
AT3G58070.1 |
Y |
T |
D |
P |
Y |
Q |
T |
K |
N |
K |
E |
E |
E |
E |
E |
E |
D |
Q |
T |
G |
D |
N |
S |
T |
D |
N |
N |
S |
I |
S |
H |
N |
R |
R |
F |
E |
C |
H |
Y |
C |
F |
R |
N |
F |
P |
T |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
gm052163_Glyma1 |
- |
- |
- |
- |
- |
- |
S |
P |
S |
Q |
H |
N |
N |
T |
N |
K |
D |
V |
N |
N |
N |
N |
V |
- |
E |
N |
N |
G |
A |
E |
S |
S |
R |
R |
F |
E |
C |
H |
Y |
C |
C |
R |
N |
F |
P |
T |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
pt007625_POPTR_ |
- |
- |
- |
- |
- |
- |
S |
P |
A |
A |
D |
E |
S |
E |
S |
A |
E |
T |
N |
E |
D |
T |
V |
K |
E |
S |
E |
S |
S |
D |
N |
N |
R |
R |
F |
E |
C |
H |
Y |
C |
C |
R |
N |
F |
P |
T |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
|
AT3G58070.1 |
R |
Q |
L |
A |
K |
R |
- |
G |
V |
S |
S |
Y |
F |
Y |
H |
P |
D |
N |
N |
P |
Y |
S |
Y |
R |
H |
Y |
P |
S |
W |
T |
N |
G |
P |
L |
T |
A |
A |
R |
S |
Y |
G |
G |
F |
S |
S |
G |
P |
K |
P |
S |
G |
Y |
Y |
T |
R |
P |
S |
Y |
G |
S |
gm052163_Glyma1 |
R |
Q |
H |
A |
K |
R |
- |
H |
L |
Q |
S |
T |
L |
- |
I |
S |
D |
A |
N |
A |
Y |
S |
F |
M |
N |
Y |
S |
S |
N |
S |
S |
S |
A |
M |
I |
- |
G |
R |
F |
Y |
G |
N |
S |
Y |
S |
H |
Q |
Q |
- |
- |
- |
- |
- |
L |
Q |
P |
I |
N |
G |
S |
pt007625_POPTR_ |
R |
Q |
H |
A |
K |
R |
A |
H |
L |
Q |
- |
- |
- |
- |
- |
I |
D |
S |
T |
P |
S |
S |
A |
M |
T |
Y |
P |
S |
W |
N |
S |
H |
S |
N |
T |
- |
S |
R |
F |
Y |
G |
S |
H |
G |
S |
Y |
S |
Q |
- |
- |
- |
- |
- |
- |
Q |
P |
I |
N |
G |
S |
|
AT3G58070.1 |
Q |
L |
G |
L |
W |
R |
L |
P |
P |
R |
V |
Q |
G |
V |
Y |
N |
S |
N |
A |
A |
F |
T |
S |
N |
G |
S |
S |
S |
S |
S |
N |
- |
- |
- |
- |
- |
- |
S |
T |
L |
P |
L |
L |
T |
R |
S |
Q |
T |
Q |
L |
S |
S |
Q |
V |
G |
G |
S |
A |
A |
Q |
gm052163_Glyma1 |
P |
L |
G |
S |
W |
R |
I |
P |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
A |
T |
T |
A |
H |
A |
Q |
S |
N |
P |
I |
F |
N |
R |
E |
C |
S |
L |
H |
P |
L |
P |
L |
F |
S |
G |
E |
E |
M |
V |
N |
A |
R |
M |
G |
F |
- |
S |
G |
S |
Q |
pt007625_POPTR_ |
P |
L |
G |
L |
W |
R |
I |
P |
A |
V |
- |
- |
- |
- |
- |
- |
- |
H |
G |
G |
G |
T |
F |
H |
H |
S |
D |
R |
S |
M |
H |
- |
- |
- |
- |
- |
- |
H |
P |
L |
P |
L |
F |
A |
G |
E |
E |
L |
K |
P |
S |
P |
A |
G |
T |
G |
S |
S |
S |
Q |
|
AT3G58070.1 |
N |
R |
M |
S |
S |
Y |
G |
- |
Y |
G |
L |
S |
P |
N |
V |
Q |
D |
H |
V |
S |
L |
D |
L |
H |
L |
gm052163_Glyma1 |
N |
R |
- |
- |
- |
F |
G |
N |
Y |
D |
P |
K |
S |
S |
V |
N |
D |
H |
L |
S |
L |
D |
L |
H |
L |
pt007625_POPTR_ |
G |
R |
- |
- |
- |
Y |
G |
- |
Y |
D |
S |
K |
P |
S |
A |
Q |
D |
H |
V |
S |
L |
D |
L |
H |
L |
|
|