fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58070.1 VQDHVSLDLHL at 247/253 in AT3G58070.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007625 AQDHVSLDLHL in 210/215 AT3G58070.1 1st_1st 0.336798336 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G58070.1     MDEATGETETQDFMNVESFSQLPFIRRPKDKNPKPIRVFGKDFTGRDFSITTGQEDYTDP
pt007625_POPTR_ MDKV--ERETHDFMNVESFSQLPFI-RPAPVKEKGIRLFGIEFGSNNDS----------P
                **:.  * **:************** **   : * **:** :* ..: *          *

AT3G58070.1     YQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLA
pt007625_POPTR_ AADESESAETNEDTVKESESSDN----NRRFECHYCCRNFPTSQALGGHQNAHKRERQHA
                   :.:. * :** . :..:.:*    ********* ********************* *

AT3G58070.1     KRGVSSYFYHPDNNPYSYRHYPSWTNGPLTAARSYGGFSSGPKPSGYYTRPSYGSQLGLW
pt007625_POPTR_ KRA----HLQIDSTPSSAMTYPSW-NSHSNTSRFYGSHGS------YSQQPINGSPLGLW
                **.    . : *..* *   **** *.  .::* **...*      *  :*  ** ****

AT3G58070.1     RLPPRVQGVYNSNAAFTSNGSSSSSNSTLPLLTRSQTQLSSQVGGSAAQNRMSSYGYGLS
pt007625_POPTR_ RIPA-VHG------GGTFHHSDRSMHHPLPLFAGEELKPSPAGTGSSSQGR---YGYDSK
                *:*. *:*      . * : *. * : .***:: .: : *.   **::*.*   ***. .

AT3G58070.1     PNVQDHVSLDLHL
pt007625_POPTR_ PSAQDHVSLDLHL
                *..**********
BoxShade v3.31 C (beta, 970507) Output
AT3G58070.1     M D E A T G E T E T Q D F M N V E S F S Q L P F I R R P K D K N P K P I R V F G K D F T G R D F S I T T G Q E D Y T D P
pt007625_POPTR_    M D K V - - E R E T H D F M N V E S F S Q L P F I - R P A P V K E K G I R L F G I E F G S N N D S - - - - - - - - - - P
 
AT3G58070.1     Y Q T K N K E E E E E E D Q T G D N S T D N N S I S H N R R F E C H Y C F R N F P T S Q A L G G H Q N A H K R E R Q L A
pt007625_POPTR_    A A D E S E S A E T N E D T V K E S E S S D N - - - - N R R F E C H Y C C R N F P T S Q A L G G H Q N A H K R E R Q H A
 
AT3G58070.1     K R G V S S Y F Y H P D N N P Y S Y R H Y P S W T N G P L T A A R S Y G G F S S G P K P S G Y Y T R P S Y G S Q L G L W
pt007625_POPTR_    K R A - - - - H L Q I D S T P S S A M T Y P S W - N S H S N T S R F Y G S H G S - - - - - - Y S Q Q P I N G S P L G L W
 
AT3G58070.1     R L P P R V Q G V Y N S N A A F T S N G S S S S S N S T L P L L T R S Q T Q L S S Q V G G S A A Q N R M S S Y G Y G L S
pt007625_POPTR_    R I P A - V H G - - - - - - G G T F H H S D R S M H H P L P L F A G E E L K P S P A G T G S S S Q G R - - - Y G Y D S K
 
AT3G58070.1     P N V Q D H V S L D L H L
pt007625_POPTR_    P S A Q D H V S L D L H L
 
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