fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm018436 not found in 283aa AT3G58120.1 1st_1st 0.257425742 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G58120.1     MAQLPPKIPTMTTPNWPDFSSQKLPSIAATAAAAATAGPQQQNPSWMDEFLDFSATRRGT
Sm018436_Selmo1 ----------------------------------------------MNDYSNSSATTSSV
                                                              *::: : ***  ..

AT3G58120.1     -HRRSISDSIAFLE----PPSSGVGNHHFDRFDDEQFM---SMFNDDVHNNNHNHHHHHS
Sm018436_Selmo1 KHRRSVSDTAAFIDNASPPPAIAQTDERHEK--EEQLVKNPQQLSDVLLEGSMN------
                 ****:**: **::    **: .  :.:.::  :**::   . :.* : :.. *      

AT3G58120.1     INGNVGPTRSSSNTSTPSD------HNSLSDDDNNKEAPPSDHDHHMDNNVANQNNAAGN
Sm018436_Selmo1 -KIDISPKNSSPTISDGQDGDCVVVANQVLDDDISLD-----------------------
                 : ::.*..**.. *  .*       *.: *** . :                       

AT3G58120.1     NYNESDEVQSQCKTEPQDGPSANQNSGGSSGNRIHDPKRVKRILANRQSAQRSRVRKLQY
Sm018436_Selmo1 -------------------PSL-------------DPKRARRIIANRQSAQRSRIRKLQY
                                   **              ****.:**:**********:*****

AT3G58120.1     ISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDNSAIKQRIAALAQDKIFKDAHQEAL
Sm018436_Selmo1 IAELEKNM-----EVSTLTPQVSFLDHQRVLLNVDNGVMKQRIAALVQNVRLKDAHNEAL
                *:***:.:     ***.*:*:*:******:******..:*******.*:  :****:***

AT3G58120.1     KREIERLRQVYHQQSLKKME-----------NNVSDQSPADIKPS---------------
Sm018436_Selmo1 RKEAESLRQLYQQQQ-QQFEIQYHQFDGFIGSNPQDHGSGSSSNSGVLITHKNTSALLSG
                ::* * ***:*:**. :::*           .* .*:.... . *               

AT3G58120.1     --VEKEQLLNV----------------------------
Sm018436_Selmo1 SGGATEKLDDACYSHTTMPDFGGATTRATCAPLSLSLKF
                    .*:* :.
BoxShade v3.31 C (beta, 970507) Output
AT3G58120.1     M A Q L P P K I P T M T T P N W P D F S S Q K L P S I A A T A A A A A T A G P Q Q Q N P S W M D E F L D F S A T R R G T
Sm018436_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N D Y S N S S A T T S S V
 
AT3G58120.1     - H R R S I S D S I A F L E - - - - P P S S G V G N H H F D R F D D E Q F M - - - S M F N D D V H N N N H N H H H H H S
Sm018436_Selmo1    K H R R S V S D T A A F I D N A S P P P A I A Q T D E R H E K - - E E Q L V K N P Q Q L S D V L L E G S M N - - - - - -
 
AT3G58120.1     I N G N V G P T R S S S N T S T P S D - - - - - - H N S L S D D D N N K E A P P S D H D H H M D N N V A N Q N N A A G N
Sm018436_Selmo1    - K I D I S P K N S S P T I S D G Q D G D C V V V A N Q V L D D D I S L D - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G58120.1     N Y N E S D E V Q S Q C K T E P Q D G P S A N Q N S G G S S G N R I H D P K R V K R I L A N R Q S A Q R S R V R K L Q Y
Sm018436_Selmo1    - - - - - - - - - - - - - - - - - - - P S L - - - - - - - - - - - - - D P K R A R R I I A N R Q S A Q R S R I R K L Q Y
 
AT3G58120.1     I S E L E R S V T S L Q T E V S V L S P R V A F L D H Q R L L L N V D N S A I K Q R I A A L A Q D K I F K D A H Q E A L
Sm018436_Selmo1    I A E L E K N M - - - - - E V S T L T P Q V S F L D H Q R V L L N V D N G V M K Q R I A A L V Q N V R L K D A H N E A L
 
AT3G58120.1     K R E I E R L R Q V Y H Q Q S L K K M E - - - - - - - - - - - N N V S D Q S P A D I K P S - - - - - - - - - - - - - - -
Sm018436_Selmo1    R K E A E S L R Q L Y Q Q Q Q - Q Q F E I Q Y H Q F D G F I G S N P Q D H G S G S S S N S G V L I T H K N T S A L L S G
 
AT3G58120.1     - - V E K E Q L L N V - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sm018436_Selmo1    S G G A T E K L D D A C Y S H T T M P D F G G A T T R A T C A P L S L S L K F
 
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