fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58120.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012497 not found in 308aa AT2G42380.2 not_not 0.558415841 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G58120.1     MAQLPPKIPTMTTPNWPDFSSQKLPSIAATAAAAATAGPQQQ-------NPSWMDEFLDF
pt012497_POPTR_ MAQLPPKIPNV-TPSWPDFSHKKLP----ITGIMETSPPRDDIITAIVTNPSWVDEFLGF
                *********.: **.***** :***     :.   *: *:::       ****:****.*

AT3G58120.1     SATRRGTHRRSISDSIAFLE--PPSSGVGNHHFDRFDDEQFMSMFNDDVHNNNHNHHHHH
pt012497_POPTR_ SSTRRGTHRRSVSDSIAFREEAPTIST----DFDKFDDEQLMSMFNDDISN---------
                *:*********:****** *  *. *     .**:*****:*******: *         

AT3G58120.1     SINGNVGPTRSSSNTSTPSDHNSLSDDDNNKEAPPSDHDHHMDNNVANQNNAAGNNYNES
pt012497_POPTR_ ----AVAAPNSSSTPSSPSDHNSINDE---KEAIVVASKHKQQQKVRNEN----------
                     *....***..*:******:.*:   ***     .*: :::* *:*          

AT3G58120.1     DEVQSQCKTE-PQDGPSANQNSGGSSGNRIHDPKRVKRILANRQSAQRSRVRKLQYISEL
pt012497_POPTR_ DEGQSPSEWETPTTVPTATDPAATSNERKI-DPRRVKRILANRQSAQRSRVRKLQYISEL
                ** ** .: * *   *:*.: :. *. .:* **:**************************

AT3G58120.1     ERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDNSAIKQRIAALAQDKIFKDAHQEALKREI
pt012497_POPTR_ ERCVTSLQGEVSVLSPRVAYLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREI
                **.***** **********:**************:*************************

AT3G58120.1     ERLRQVYHQQSLKKMENN---VSDQSPAD--IKPSVEKE-QLLNV
pt012497_POPTR_ ERLRQVYHQQNL-KMENTSPPSASSTPSNDPTTPTTDKEQQLFQV
                **********.* ****.    :..:*::   .*:.:** **::*
BoxShade v3.31 C (beta, 970507) Output
AT3G58120.1     M A Q L P P K I P T M T T P N W P D F S S Q K L P S I A A T A A A A A T A G P Q Q Q - - - - - - - N P S W M D E F L D F
pt012497_POPTR_    M A Q L P P K I P N V - T P S W P D F S H K K L P - - - - I T G I M E T S P P R D D I I T A I V T N P S W V D E F L G F
 
AT3G58120.1     S A T R R G T H R R S I S D S I A F L E - - P P S S G V G N H H F D R F D D E Q F M S M F N D D V H N N N H N H H H H H
pt012497_POPTR_    S S T R R G T H R R S V S D S I A F R E E A P T I S T - - - - D F D K F D D E Q L M S M F N D D I S N - - - - - - - - -
 
AT3G58120.1     S I N G N V G P T R S S S N T S T P S D H N S L S D D D N N K E A P P S D H D H H M D N N V A N Q N N A A G N N Y N E S
pt012497_POPTR_    - - - - A V A A P N S S S T P S S P S D H N S I N D E - - - K E A I V V A S K H K Q Q Q K V R N E N - - - - - - - - - -
 
AT3G58120.1     D E V Q S Q C K T E - P Q D G P S A N Q N S G G S S G N R I H D P K R V K R I L A N R Q S A Q R S R V R K L Q Y I S E L
pt012497_POPTR_    D E G Q S P S E W E T P T T V P T A T D P A A T S N E R K I - D P R R V K R I L A N R Q S A Q R S R V R K L Q Y I S E L
 
AT3G58120.1     E R S V T S L Q T E V S V L S P R V A F L D H Q R L L L N V D N S A I K Q R I A A L A Q D K I F K D A H Q E A L K R E I
pt012497_POPTR_    E R C V T S L Q G E V S V L S P R V A Y L D H Q R L L L N V D N S A L K Q R I A A L A Q D K I F K D A H Q E A L K R E I
 
AT3G58120.1     E R L R Q V Y H Q Q S L K K M E N N - - - V S D Q S P A D - - I K P S V E K E - Q L L N V
pt012497_POPTR_    E R L R Q V Y H Q Q N L - K M E N T S P P S A S S T P S N D P T T P T T D K E Q Q L F Q V
 
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