fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034009 not found in 218aa AT3G58190.1 not_1st 0.438287153 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G58190.1     MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL
pt034009_POPTR_ MT----GLGSSCGACKFLRRKCTSECVFAPYFCYDQAAAHFAAVHKVFGASNVSKLLLHL
                **    . **.***********:. ********::*.*:****:********.**** **

AT3G58190.1     PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMI---
pt034009_POPTR_ PVHNRGDAAITISYEALARMRDPIYGCVAHIFALQQQVASLQEEIEILENQMASLTVGVA
                *: :* :********* **::*******:*********..** *:***::* *.  :   

AT3G58190.1     -FADSPTSENPN-----SYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDAT
pt034009_POPTR_ GFGSSPTISNPNCEMLFSFQQDAMNTQYYQNPQSAQLNHSG----YTTG-----------
                 *..*** .***     *:  *: :: *::: *.   :*.     * **           

AT3G58190.1     ESSYHNETSSGMGEF---SIYSDLEQHLNTFNQDH-------LKELQSANFGYISFS---
pt034009_POPTR_ -----NQTFDGQMNVPLTPLYGWEDQ--DIFCNSHPRPLERLLEEVDKEIFTYCSWPDSG
                     *:* .*  :.   .:*.  :*  : * :.*       *:*::.  * * *:.   

AT3G58190.1     ----
pt034009_POPTR_ NIII
BoxShade v3.31 C (beta, 970507) Output
AT3G58190.1     M T S S S S S S G S P C G A C K F L R R K C A K G C V F A P Y F C H E Q G A S H F A A I H K V F G A S N A S K L L S H L
pt034009_POPTR_    M T - - - - G L G S S C G A C K F L R R K C T S E C V F A P Y F C Y D Q A A A H F A A V H K V F G A S N V S K L L L H L
 
AT3G58190.1     P I S D R C E A A I T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A E L E I L K Q Q A A Q S M I - - -
pt034009_POPTR_    P V H N R G D A A I T I S Y E A L A R M R D P I Y G C V A H I F A L Q Q Q V A S L Q E E I E I L E N Q M A S L T V G V A
 
AT3G58190.1     - F A D S P T S E N P N - - - - - S Y Y G D T T K A P Y H H D H Q N I Y H H H D Q T H L V Y Q T G S S G T V Q H G D A T
pt034009_POPTR_    G F G S S P T I S N P N C E M L F S F Q Q D A M N T Q Y Y Q N P Q S A Q L N H S G - - - - Y T T G - - - - - - - - - - -
 
AT3G58190.1     E S S Y H N E T S S G M G E F - - - S I Y S D L E Q H L N T F N Q D H - - - - - - - L K E L Q S A N F G Y I S F S - - -
pt034009_POPTR_    - - - - - N Q T F D G Q M N V P L T P L Y G W E D Q - - D I F C N S H P R P L E R L L E E V D K E I F T Y C S W P D S G
 
AT3G58190.1     - - - -
pt034009_POPTR_    N I I I
 
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