fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039807 not found in 223aa AT3G58190.1 1st_1st 0.531486146 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G58190.1     MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL
pt039807_POPTR_ MT----GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGAQHFAAIHKVFGASNVSKLLAHL
                **    .***************.:**************.*************.****:**

AT3G58190.1     PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD
pt039807_POPTR_ PVSDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAQS--FLN
                *:***.***:*********************************:*  **:*****  * :

AT3G58190.1     SPTSENPN-SYYGDTTKAPYHHDHQNIYHHHDQTHL------------------VYQTGS
pt039807_POPTR_ GSATTNPNDKYYG---KPSYPQELQSWFHSENSSTVPQLNPNNLTNNMPYCENGIMDPNS
                ..:: *** .***   *..* :: *. :* .:.: :                  : :..*

AT3G58190.1     SGTVQHGDATESSYHNETSSGMGEFSIYSDLEQHLNTFNQDHLKELQSANFGYISFS
pt039807_POPTR_ MGNYGNSSSSFDSFE-EASHSMSSFDMQTDNLQ----WTYQHADDLQSMAFGYTQHS
                 *.  :..:: .*:. *:* .*..*.: :*  *    :. :* .:***  *** ..*
BoxShade v3.31 C (beta, 970507) Output
AT3G58190.1     M T S S S S S S G S P C G A C K F L R R K C A K G C V F A P Y F C H E Q G A S H F A A I H K V F G A S N A S K L L S H L
pt039807_POPTR_    M T - - - - G S G S P C G A C K F L R R K C V R G C V F A P Y F C H E Q G A Q H F A A I H K V F G A S N V S K L L A H L
 
AT3G58190.1     P I S D R C E A A I T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A E L E I L K Q Q A A Q S M I F A D
pt039807_POPTR_    P V S D R S E A A V T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A Q L A S L K E Q A A Q S - - F L N
 
AT3G58190.1     S P T S E N P N - S Y Y G D T T K A P Y H H D H Q N I Y H H H D Q T H L - - - - - - - - - - - - - - - - - - V Y Q T G S
pt039807_POPTR_    G S A T T N P N D K Y Y G - - - K P S Y P Q E L Q S W F H S E N S S T V P Q L N P N N L T N N M P Y C E N G I M D P N S
 
AT3G58190.1     S G T V Q H G D A T E S S Y H N E T S S G M G E F S I Y S D L E Q H L N T F N Q D H L K E L Q S A N F G Y I S F S
pt039807_POPTR_    M G N Y G N S S S S F D S F E - E A S H S M S S F D M Q T D N L Q - - - - W T Y Q H A D D L Q S M A F G Y T Q H S
 
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