fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002570 not found in 245aa AT3G58190.1 not_1st 0.471032745 II
Sb002572 not found in 168aa AT3G58190.1 not_1st 0.410579345 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G58190.1     MTSSSSSS-----GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASK
Sb002572_Sorbi1 MASSGTSGGGGSPGSPCGACKFLRRKCAAECVFAPHFCAEDGAAQFAAIHKVFGASNAAK
Sb002570_Sorbi1 --MTGF-------GSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSK
                   :.        **************.  *****:** *:**::************.:*

AT3G58190.1     LLSHLPISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQ-
Sb002572_Sorbi1 LLQQVPPADRSEAAATVTYEAQARLRDPIYGCVAHIFALQQQVASLQMQVLQAKAQVAQ-
Sb002570_Sorbi1 LLAHLPLADRPEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAQAAQG
                ** ::* :** *** *::*******:*******:********* .** ::   * *.** 

AT3G58190.1     ------------------------------SMIFADSPTSENP----------------N
Sb002572_Sorbi1 -------------------------------TMAAAGPQGTNPLLQRWPLEPESLSTQSS
Sb002570_Sorbi1 QQGVHEDAKGYVGSAAAEQLGYGYPWCNGNGGVAAAGTVG-------------APAAQLA
                                                : * .. .                    

AT3G58190.1     SYYGD-------TTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATE-SSYHNETS
Sb002572_Sorbi1 GCYSD-------------------MY--------------------------CGFGDQEE
Sb002570_Sorbi1 GAYGNGGHESLTALLGSSDYMQQSLYHAFEHAGADDDDGRQGNDAFEAAAESSSFGAEES
                . *.:                   :*                          ..:  : .

AT3G58190.1     SGMGEFSIYSDLEQHLNTFNQDHLKELQSANFGYISFS-
Sb002572_Sorbi1 GSYTR----------------------------------
Sb002570_Sorbi1 GGWRSSSGYQDCE------------DLQSVAYAYLNHRS
                ..
BoxShade v3.31 C (beta, 970507) Output
AT3G58190.1     M T S S S S S S - - - - - G S P C G A C K F L R R K C A K G C V F A P Y F C H E Q G A S H F A A I H K V F G A S N A S K
Sb002572_Sorbi1    M A S S G T S G G G G S P G S P C G A C K F L R R K C A A E C V F A P H F C A E D G A A Q F A A I H K V F G A S N A A K
Sb002570_Sorbi1    - - M T G F - - - - - - - G S P C G A C K F L R R K C V R G C V F A P Y F C H E Q G A A H F A A I H K V F G A S N V S K
 
AT3G58190.1     L L S H L P I S D R C E A A I T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A E L E I L K Q Q A A Q -
Sb002572_Sorbi1    L L Q Q V P P A D R S E A A A T V T Y E A Q A R L R D P I Y G C V A H I F A L Q Q Q V A S L Q M Q V L Q A K A Q V A Q -
Sb002570_Sorbi1    L L A H L P L A D R P E A A V T I S Y E A Q A R L R D P I Y G C V A H I F A L Q Q Q V M T L Q A Q L A S L K A Q A A Q G
 
AT3G58190.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S M I F A D S P T S E N P - - - - - - - - - - - - - - - - N
Sb002572_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T M A A A G P Q G T N P L L Q R W P L E P E S L S T Q S S
Sb002570_Sorbi1    Q Q G V H E D A K G Y V G S A A A E Q L G Y G Y P W C N G N G G V A A A G T V G - - - - - - - - - - - - - A P A A Q L A
 
AT3G58190.1     S Y Y G D - - - - - - - T T K A P Y H H D H Q N I Y H H H D Q T H L V Y Q T G S S G T V Q H G D A T E - S S Y H N E T S
Sb002572_Sorbi1    G C Y S D - - - - - - - - - - - - - - - - - - - M Y - - - - - - - - - - - - - - - - - - - - - - - - - - C G F G D Q E E
Sb002570_Sorbi1    G A Y G N G G H E S L T A L L G S S D Y M Q Q S L Y H A F E H A G A D D D D G R Q G N D A F E A A A E S S S F G A E E S
 
AT3G58190.1     S G M G E F S I Y S D L E Q H L N T F N Q D H L K E L Q S A N F G Y I S F S -
Sb002572_Sorbi1    G S Y T R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb002570_Sorbi1    G G W R S S S G Y Q D C E - - - - - - - - - - - - D L Q S V A Y A Y L N H R S
 
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