fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028241 not found in 283aa AT2G42430.1 not_not 0.413098236 III
Sb002297 not found in 276aa AT2G45420.1 not_not 0.408060453 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G58190.1     MTSSSSSS----------------------------GSPCGACKFLRRKCA-----KGC-
Sb002297_Sorbi1 MSAGGGTSTLGGGGPSGSGASGGPGPGGSGGGGGGGGGPCGACKFLRRKCV-----SGC-
Sb028241_Sorbi1 -----GRS-------------------------------------RRRRCCQRRDDRGCC
                     . *                                      **:*       ** 

AT3G58190.1     -------------VFAPYF--------------------CHEQGASH----FAAI-----
Sb002297_Sorbi1 -------------IFAPYF--------------------DSEQGAAH----FAAV-----
Sb028241_Sorbi1 RRDGRGVPVRRVQVPAPAVRAGVRIRALLQQRPGRRALRRHPQGVRRQQRIQAAVAPPRR
                             : ** .                       **. :     **:     

AT3G58190.1     --------HKVFGASNASKLLSHL-------PISDRCEAAITISYEAQARLQDPIYGCVS
Sb002297_Sorbi1 --------HKVFGASNVSKLLLQI-------PAHKRLDAVVTICYEAQARLRDPVYGCVA
Sb028241_Sorbi1 RPLRGRRHHHLRGAGQATRPCLRLRRPDLRPPAAGRHPASAADAGQGAARVRRP------
                        *:: **.:.::   ::       *   *  *  : . :. **:: *      

AT3G58190.1     HIFALQQQVVNLQAELEILKQQAAQSMIFADSP--------------TSENPNSYYGDTT
Sb002297_Sorbi1 HIFALQQQVVNLQAELTYLQAHLATLELPSPPPLPAPPQMPLPGAFSISDLPSSTSVPTT
Sb028241_Sorbi1 -----------------------RRRALAGEPPVARQRQH--------------------
                                           : . .*                           

AT3G58190.1     --------------------KAPYHHDHQNIYHHHDQTHLVYQTGSSGT-VQHGDATESS
Sb002297_Sorbi1 VDLSALFDPPPQQPQWAVQAAQPHHHHHHHQQPQQQQHHQLRQPAPYGAPVRPGGGGPGM
Sb028241_Sorbi1 --------------------QRPAPPGHGVQRQETRSPRRLLHAGAHGR-VQ--------
                                      *    *     .  . : : :... *  *:        

AT3G58190.1     YHNETSSGMGEFSIYSDLEQHLNTFNQDHLKELQSANFGYISFS----------------
Sb002297_Sorbi1 --AESSGGGGD---------DLQSLARELLDRHRS---GGVKLEQPPPPPHSR-------
Sb028241_Sorbi1 --GRRRRGRAA-------------LCRQ----------GGCRRAPVPGPGHDEEPQLLPV
                   .   * .              : ::          *                     

AT3G58190.1     ---
Sb002297_Sorbi1 ---
Sb028241_Sorbi1 AAC
BoxShade v3.31 C (beta, 970507) Output
AT3G58190.1     M T S S S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - G S P C G A C K F L R R K C A - - - - - K G C -
Sb002297_Sorbi1    M S A G G G T S T L G G G G P S G S G A S G G P G P G G S G G G G G G G G G P C G A C K F L R R K C V - - - - - S G C -
Sb028241_Sorbi1    - - - - - G R S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R R R R C C Q R R D D R G C C
 
AT3G58190.1     - - - - - - - - - - - - - V F A P Y F - - - - - - - - - - - - - - - - - - - - C H E Q G A S H - - - - F A A I - - - - -
Sb002297_Sorbi1    - - - - - - - - - - - - - I F A P Y F - - - - - - - - - - - - - - - - - - - - D S E Q G A A H - - - - F A A V - - - - -
Sb028241_Sorbi1    R R D G R G V P V R R V Q V P A P A V R A G V R I R A L L Q Q R P G R R A L R R H P Q G V R R Q Q R I Q A A V A P P R R
 
AT3G58190.1     - - - - - - - - H K V F G A S N A S K L L S H L - - - - - - - P I S D R C E A A I T I S Y E A Q A R L Q D P I Y G C V S
Sb002297_Sorbi1    - - - - - - - - H K V F G A S N V S K L L L Q I - - - - - - - P A H K R L D A V V T I C Y E A Q A R L R D P V Y G C V A
Sb028241_Sorbi1    R P L R G R R H H H L R G A G Q A T R P C L R L R R P D L R P P A A G R H P A S A A D A G Q G A A R V R R P - - - - - -
 
AT3G58190.1     H I F A L Q Q Q V V N L Q A E L E I L K Q Q A A Q S M I F A D S P - - - - - - - - - - - - - - T S E N P N S Y Y G D T T
Sb002297_Sorbi1    H I F A L Q Q Q V V N L Q A E L T Y L Q A H L A T L E L P S P P P L P A P P Q M P L P G A F S I S D L P S S T S V P T T
Sb028241_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - R R R A L A G E P P V A R Q R Q H - - - - - - - - - - - - - - - - - - - -
 
AT3G58190.1     - - - - - - - - - - - - - - - - - - - - K A P Y H H D H Q N I Y H H H D Q T H L V Y Q T G S S G T - V Q H G D A T E S S
Sb002297_Sorbi1    V D L S A L F D P P P Q Q P Q W A V Q A A Q P H H H H H H H Q Q P Q Q Q Q H H Q L R Q P A P Y G A P V R P G G G G P G M
Sb028241_Sorbi1    - - - - - - - - - - - - - - - - - - - - Q R P A P P G H G V Q R Q E T R S P R R L L H A G A H G R - V Q - - - - - - - -
 
AT3G58190.1     Y H N E T S S G M G E F S I Y S D L E Q H L N T F N Q D H L K E L Q S A N F G Y I S F S - - - - - - - - - - - - - - - -
Sb002297_Sorbi1    - - A E S S G G G G D - - - - - - - - - D L Q S L A R E L L D R H R S - - - G G V K L E Q P P P P P H S R - - - - - - -
Sb028241_Sorbi1    - - G R R R R G R A A - - - - - - - - - - - - - L C R Q - - - - - - - - - - G G C R R A P V P G P G H D E E P Q L L P V
 
AT3G58190.1     - - -
Sb002297_Sorbi1    - - -
Sb028241_Sorbi1    A A C
 
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