fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026684 not found in 179aa AT3G58190.1 not_1st 0.513853904 II
Gm052291 not found in 208aa AT3G58190.1 not_1st 0.506297229 II
Gm007213 not found in 212aa AT3G58190.1 not_1st 0.506297229 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G58190.1     MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL
gm026684_Glyma1 MT----GTGSPCGACKFLRRKCVRGCVFAPYFCQEQGATHFAAIHKVFGASNVSKLLAHL
gm007213_Glyma0 MT----GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGVTHFAAIHKVFGASNVSKLLAHL
gm052291_Glyma1 MT----GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGSTHFAAIHKVFGASNVSKHLAHL
                **    .:**************.:*********:*** :*************.** *:**

AT3G58190.1     PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD
gm026684_Glyma1 PVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSCL--N
gm007213_Glyma0 PVSDRCEATVTISYEAQARLQDPIYGCVAHIFALQEQVVNLQAQLAYLREQAGQIYL--N
gm052291_Glyma1 PVSDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVSLQAQLVYLREQASQIYL--N
                *:******::******************:******:***.***:*  *::**.*  :  :

AT3G58190.1     SPTSENPNSYYGDTTKAPYHHDHQNIYHHHDQT----HLVYQTGSSGTVQHGDATE----
gm026684_Glyma1 GTINENPNEKLLEKSSAALPQDLQSWFQLENSNLGPEFLPNMCTNLSTQHYGNNALMMED
gm007213_Glyma0 ASATENPNEKLLGKPT-TFPQDLQSRFQMENSNMASQFLPNLSTNPSTHYYGNTNSLMEP
gm052291_Glyma1 GSATENPNEKYLGKPT-TFPQDLQSWFQMENSNLASQFLPNLSTNPSTQYYGNTNTLVEP
                .. .****.    ... .  :* *. :: .:..    .*     . .*  :*:       

AT3G58190.1     -SSYHNETSSGMGEFSI-YSDLEQHLNTFNQDHLKELQSANFGYISFS
gm026684_Glyma1 LNPIG-------------------------------------------
gm007213_Glyma0 -NPIGNYESSGTVEESISFSSFEESCNSMSYDMQRQWGLS--------
gm052291_Glyma1 -NPIGNYENSGTVEESISFSSFKESCNSMSYDMQRQ------------
                 ..
BoxShade v3.31 C (beta, 970507) Output
AT3G58190.1     M T S S S S S S G S P C G A C K F L R R K C A K G C V F A P Y F C H E Q G A S H F A A I H K V F G A S N A S K L L S H L
gm026684_Glyma1    M T - - - - G T G S P C G A C K F L R R K C V R G C V F A P Y F C Q E Q G A T H F A A I H K V F G A S N V S K L L A H L
gm007213_Glyma0    M T - - - - G S G S P C G A C K F L R R K C V R G C V F A P Y F C H E Q G V T H F A A I H K V F G A S N V S K L L A H L
gm052291_Glyma1    M T - - - - G S G S P C G A C K F L R R K C V R G C V F A P Y F C H E Q G S T H F A A I H K V F G A S N V S K H L A H L
 
AT3G58190.1     P I S D R C E A A I T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A E L E I L K Q Q A A Q S M I F A D
gm026684_Glyma1    P V S D R C E A A V T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A Q L A Y L K E Q A A Q S C L - - N
gm007213_Glyma0    P V S D R C E A T V T I S Y E A Q A R L Q D P I Y G C V A H I F A L Q E Q V V N L Q A Q L A Y L R E Q A G Q I Y L - - N
gm052291_Glyma1    P V S D R C E A A V T I S Y E A Q A R L Q D P I Y G C V A H I F A L Q Q Q V V S L Q A Q L V Y L R E Q A S Q I Y L - - N
 
AT3G58190.1     S P T S E N P N S Y Y G D T T K A P Y H H D H Q N I Y H H H D Q T - - - - H L V Y Q T G S S G T V Q H G D A T E - - - -
gm026684_Glyma1    G T I N E N P N E K L L E K S S A A L P Q D L Q S W F Q L E N S N L G P E F L P N M C T N L S T Q H Y G N N A L M M E D
gm007213_Glyma0    A S A T E N P N E K L L G K P T - T F P Q D L Q S R F Q M E N S N M A S Q F L P N L S T N P S T H Y Y G N T N S L M E P
gm052291_Glyma1    G S A T E N P N E K Y L G K P T - T F P Q D L Q S W F Q M E N S N L A S Q F L P N L S T N P S T Q Y Y G N T N T L V E P
 
AT3G58190.1     - S S Y H N E T S S G M G E F S I - Y S D L E Q H L N T F N Q D H L K E L Q S A N F G Y I S F S
gm026684_Glyma1    L N P I G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm007213_Glyma0    - N P I G N Y E S S G T V E E S I S F S S F E E S C N S M S Y D M Q R Q W G L S - - - - - - - -
gm052291_Glyma1    - N P I G N Y E N S G T V E E S I S F S S F K E S C N S M S Y D M Q R Q - - - - - - - - - - - -
 
0