fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035737 not found in 237aa AT3G58190.1 1st_1st 0.521410579 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G58190.1     MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL
gm035737_Glyma1 MT----GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHL
                **    .***************.:**************:*************.****:**

AT3G58190.1     PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD
gm035737_Glyma1 PVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSCL--D
                *:*******:*********************************:*  **:***** :  *

AT3G58190.1     SPTSENPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSG-------------TVQH
gm035737_Glyma1 GSINENPSEKLFEKSSSALPQDLQSWFN---------QVGNSNLGPEFLPNMCTNLSTQH
                .. .***..   :.:.:.  :* *. ::         *.*.*.             :.**

AT3G58190.1     -------GDATESSYHNETSSGM------------GEFSIYSDLEQHLNTFNQDHLKELQ
gm035737_Glyma1 YGNNALMEDLNPIGINYETSGAMEGNNSSSFDDSSNNYSMSYDMQTNRRTWGFHEVEDLH
                        * .  . : ***..*            .::*:  *:: : .*:. ..:::*:

AT3G58190.1     SANFGYISFS--
gm035737_Glyma1 SVAFGYGTRSHS
                *. *** : *
BoxShade v3.31 C (beta, 970507) Output
AT3G58190.1     M T S S S S S S G S P C G A C K F L R R K C A K G C V F A P Y F C H E Q G A S H F A A I H K V F G A S N A S K L L S H L
gm035737_Glyma1    M T - - - - G S G S P C G A C K F L R R K C V R G C V F A P Y F C H E Q G A T H F A A I H K V F G A S N V S K L L A H L
 
AT3G58190.1     P I S D R C E A A I T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A E L E I L K Q Q A A Q S M I F A D
gm035737_Glyma1    P V S D R C E A A V T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A Q L A Y L K E Q A A Q S C L - - D
 
AT3G58190.1     S P T S E N P N S Y Y G D T T K A P Y H H D H Q N I Y H H H D Q T H L V Y Q T G S S G - - - - - - - - - - - - - T V Q H
gm035737_Glyma1    G S I N E N P S E K L F E K S S S A L P Q D L Q S W F N - - - - - - - - - Q V G N S N L G P E F L P N M C T N L S T Q H
 
AT3G58190.1     - - - - - - - G D A T E S S Y H N E T S S G M - - - - - - - - - - - - G E F S I Y S D L E Q H L N T F N Q D H L K E L Q
gm035737_Glyma1    Y G N N A L M E D L N P I G I N Y E T S G A M E G N N S S S F D D S S N N Y S M S Y D M Q T N R R T W G F H E V E D L H
 
AT3G58190.1     S A N F G Y I S F S - -
gm035737_Glyma1    S V A F G Y G T R S H S
 
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