fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G58710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034357 not found in 263aa AT3G58710.2 1st_not 0.4375 II
Pt024675 not found in 268aa AT1G29280.1 1st_not 0.411290322 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G58710.1     -MHRRAAIQ---ESDDEED---ETYNDVVPESPSSCEDSKISKPTPKKSRRNVEKRVVSV
gm034357_Glyma1 MHHRRFSKLIHVADPDEPESGPEPASEAGPASPSSGEDTKTEAPSPKK-RREMKKRVVTI
pt024675_POPTR_ -MDRRFNINPLITEQEEND---NSAQESGPESPPSNDMKMPSTSSPKRSKKAMQKRVVSV
                  .**        . :* :   :. .:  * **.* : .  . .:**: :: ::****::

AT3G58710.1     PIADVEGSKSRGE-VYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSR
gm034357_Glyma1 PIGDVDGSKSKGE-NYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSR
pt024675_POPTR_ PIKDLEGSRLKGENASPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSK
                ** *::**: :**   *******************************************:

AT3G58710.1     VDPSKLMITYACDHNH--PF--PSSSAN-TKSHHRSSVV---------LKTAKKEEEYEE
gm034357_Glyma1 VDPTKLIVTYAYEHNHSLPFPKSNSSAA-------SAAVSDGAAVLP-IESAARFPP---
pt024675_POPTR_ VDPTMLVITYSCEHNH--PWPPPSRSHNHHKNHHNSSSPKHNTTTKPEVSTTHPDNPEPE
                ***: *::**: :***  *:  .. *         *:           :.::        

AT3G58710.1     EEEELTVTAAEEPPAGLDLSHVDSPLLLGGCYSEIGEFGWFYDASISSSS---------G
gm034357_Glyma1 -EEEMTVFATD---SDLELAG-DAAVLLSHHHH---HFGWFDD--VASTGVLESPIC--G
pt024675_POPTR_ HEEKFT-----------DLGN-DGSLISTTTTSD--EFSWFGEIETTSSTILETPFFAEG
                 **::*           :*.  *..::         .*.** :   :*:          *

AT3G58710.1     SSNFLDVTLERGFSVGQEEDESLFGDLGDLPDCASVFRRGTVATEEQHRRCD--FG-AIP
gm034357_Glyma1 EVD--DVAV-----PMREEDESLFADLGELPECSAVFRRRNIPATS-AIRCGGITG----
pt024675_POPTR_ EA---DADMASMFFPMRDEDESLFADLGELPECSSVFR---------HQRSG--VGPQVQ
                .    *. :       ::******.***:**:*::***           *..   *    

AT3G58710.1     FCDSSR
gm034357_Glyma1 ------
pt024675_POPTR_ IC----
BoxShade v3.31 C (beta, 970507) Output
AT3G58710.1     - M H R R A A I Q - - - E S D D E E D - - - E T Y N D V V P E S P S S C E D S K I S K P T P K K S R R N V E K R V V S V
gm034357_Glyma1    M H H R R F S K L I H V A D P D E P E S G P E P A S E A G P A S P S S G E D T K T E A P S P K K - R R E M K K R V V T I
pt024675_POPTR_    - M D R R F N I N P L I T E Q E E N D - - - N S A Q E S G P E S P P S N D M K M P S T S S P K R S K K A M Q K R V V S V
 
AT3G58710.1     P I A D V E G S K S R G E - V Y P P S D S W A W R K Y G Q K P I K G S P Y P R G Y Y R C S S S K G C P A R K Q V E R S R
gm034357_Glyma1    P I G D V D G S K S K G E - N Y P P S D S W A W R K Y G Q K P I K G S P Y P R G Y Y R C S S S K G C P A R K Q V E R S R
pt024675_POPTR_    P I K D L E G S R L K G E N A S P P S D S W A W R K Y G Q K P I K G S P Y P R G Y Y R C S S S K G C P A R K Q V E R S K
 
AT3G58710.1     V D P S K L M I T Y A C D H N H - - P F - - P S S S A N - T K S H H R S S V V - - - - - - - - - L K T A K K E E E Y E E
gm034357_Glyma1    V D P T K L I V T Y A Y E H N H S L P F P K S N S S A A - - - - - - - S A A V S D G A A V L P - I E S A A R F P P - - -
pt024675_POPTR_    V D P T M L V I T Y S C E H N H - - P W P P P S R S H N H H K N H H N S S S P K H N T T T K P E V S T T H P D N P E P E
 
AT3G58710.1     E E E E L T V T A A E E P P A G L D L S H V D S P L L L G G C Y S E I G E F G W F Y D A S I S S S S - - - - - - - - - G
gm034357_Glyma1    - E E E M T V F A T D - - - S D L E L A G - D A A V L L S H H H H - - - H F G W F D D - - V A S T G V L E S P I C - - G
pt024675_POPTR_    H E E K F T - - - - - - - - - - - D L G N - D G S L I S T T T T S D - - E F S W F G E I E T T S S T I L E T P F F A E G
 
AT3G58710.1     S S N F L D V T L E R G F S V G Q E E D E S L F G D L G D L P D C A S V F R R G T V A T E E Q H R R C D - - F G - A I P
gm034357_Glyma1    E V D - - D V A V - - - - - P M R E E D E S L F A D L G E L P E C S A V F R R R N I P A T S - A I R C G G I T G - - - -
pt024675_POPTR_    E A - - - D A D M A S M F F P M R D E D E S L F A D L G E L P E C S S V F R - - - - - - - - - H Q R S G - - V G P Q V Q
 
AT3G58710.1     F C D S S R
gm034357_Glyma1    - - - - - -
pt024675_POPTR_    I C - - - -
 
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