fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G59470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041001 not found in 252aa AT3G59470.1 1st_1st 0.593320235 Ia
Pt003997 not found in 262aa AT3G59470.1 1st_1st 0.618860510 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G59470.1     ------------MMMGIP-------------VELEVTTVENHNEMGESSGQAMIEQ-DDD
pt003997_POPTR_ MKVIEIVDVVFAVDFIVDNDANGDIAGN---VAVDIARARDENEIVENSVEGEFEQ-YDH
gm041001_Glyma1 ------------MEFGIDASINGETVGNATIVQINSSTA-DGNKVGCSSFNPAYKQGHDD
                            : : :              * :: : . : *::  .* :   :*  *.

AT3G59470.1     NHNELGENSGEQDEKVDLDSIPLAVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATKVG
pt003997_POPTR_ KMDK---------ESLAIDMIPDAVPAMSMVAADEPYMGQEFDSEASAHAFYNAYATRIG
gm041001_Glyma1 NITQ---------DSSGGDTIPSGIPAVSVASVDEPYVGQEFESEAAAHAFYNAYAKRVG
                :  :         :.   * ** .:. :: .  ****:****:***:**.******.::*

AT3G59470.1     FVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKRDKVIRQRAETRVGCKAMILIRKENS
pt003997_POPTR_ FVIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMILVRKASS
gm041001_Glyma1 FIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSS
                *:**********:**:.*** ****:**:*:*.**:*::**********:****:** .*

AT3G59470.1     GKWVITKFVKEHNHSLMPGRVRRGCIYDQYPNEHDKIQELMQQLAAEKKRAATYKRHLEM
pt003997_POPTR_ GKWEVTKFVKEHTHSLTPGKARRDCIYDQYPNEHDKIRELSQQLALEKKRAATYKRHLEL
gm041001_Glyma1 GKWVITKFIMEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIERKRSATYKRHLEL
                *** :***: **.*.* **: **.***:*********:** **** *:**:********:

AT3G59470.1     LFEQIEQHNESLSKRIQHIVDNVRNLEQRDHQQNHQV
pt003997_POPTR_ IFEQIEEHNESLSKKIQHIVHSVRGMENKPQQSQT--
gm041001_Glyma1 IFEQIEEHNDSLSKKIQHIVDSVKEMETKEQNQR---
                :*****:**:****:*****..*: :* : ::..
BoxShade v3.31 C (beta, 970507) Output
AT3G59470.1     - - - - - - - - - - - - M M M G I P - - - - - - - - - - - - - V E L E V T T V E N H N E M G E S S G Q A M I E Q - D D D
pt003997_POPTR_    M K V I E I V D V V F A V D F I V D N D A N G D I A G N - - - V A V D I A R A R D E N E I V E N S V E G E F E Q - Y D H
gm041001_Glyma1    - - - - - - - - - - - - M E F G I D A S I N G E T V G N A T I V Q I N S S T A - D G N K V G C S S F N P A Y K Q G H D D
 
AT3G59470.1     N H N E L G E N S G E Q D E K V D L D S I P L A V A D M T E A Q G D E P Y V G Q E F E S E A A A H G F Y N A Y A T K V G
pt003997_POPTR_    K M D K - - - - - - - - - E S L A I D M I P D A V P A M S M V A A D E P Y M G Q E F D S E A S A H A F Y N A Y A T R I G
gm041001_Glyma1    N I T Q - - - - - - - - - D S S G G D T I P S G I P A V S V A S V D E P Y V G Q E F E S E A A A H A F Y N A Y A K R V G
 
AT3G59470.1     F V I R V S K L S R S R H D G S P I G R Q L V C N K E G Y R L P S K R D K V I R Q R A E T R V G C K A M I L I R K E N S
pt003997_POPTR_    F V I R V S K L S R S R R D G S A I G R A L V C N K E G F R M P D K R E K I V R Q R A E T R V G C R A M I L V R K A S S
gm041001_Glyma1    F I I R V S K L S R S R R D G T A I G R A L V C N R E G Y R M P D K R E K I V R Q R A E T R V G C R A M I L V R K V S S
 
AT3G59470.1     G K W V I T K F V K E H N H S L M P G R V R R G C I Y D Q Y P N E H D K I Q E L M Q Q L A A E K K R A A T Y K R H L E M
pt003997_POPTR_    G K W E V T K F V K E H T H S L T P G K A R R D C I Y D Q Y P N E H D K I R E L S Q Q L A L E K K R A A T Y K R H L E L
gm041001_Glyma1    G K W V I T K F I M E H T H P L T P G K G R R D C I Y E Q Y P N E H D K I R E L S Q Q L A I E R K R S A T Y K R H L E L
 
AT3G59470.1     L F E Q I E Q H N E S L S K R I Q H I V D N V R N L E Q R D H Q Q N H Q V
pt003997_POPTR_    I F E Q I E E H N E S L S K K I Q H I V H S V R G M E N K P Q Q S Q T - -
gm041001_Glyma1    I F E Q I E E H N D S L S K K I Q H I V D S V K E M E T K E Q N Q R - - -
 
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