fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G59470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003997 not found in 262aa AT3G59470.1 1st_1st 0.618860510 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G59470.1     --MMMGIPVELEVTTVENHNEMGESSGQAMIE----QDDDNHNELGENSGE-----QDEK
pt003997_POPTR_ MKVIEIVDVVFAVDFIVDNDANGDIAGNVAVDIARARDE---NEIVENSVEGEFEQYDHK
                  ::  : * : *  : :::  *: :*:. ::    :*:   **: *** *      *.*

AT3G59470.1     VD-----LDSIPLAVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSR
pt003997_POPTR_ MDKESLAIDMIPDAVPAMSMVAADEPYMGQEFDSEASAHAFYNAYATRIGFVIRVSKLSR
                :*     :* ** **. *: . .****:****:***:**.*******::***********

AT3G59470.1     SRHDGSPIGRQLVCNKEGYRLPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVK
pt003997_POPTR_ SRRDGSAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMILVRKASSGKWEVTKFVK
                **:***.*** *******:*:*.**:*::**********:****:** .**** :*****

AT3G59470.1     EHNHSLMPGRVRRGCIYDQYPNEHDKIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNE
pt003997_POPTR_ EHTHSLTPGKARRDCIYDQYPNEHDKIRELSQQLALEKKRAATYKRHLELIFEQIEEHNE
                **.*** **:.**.*************:** **** *************::*****:***

AT3G59470.1     SLSKRIQHIVDNVRNLEQRDHQQNHQV
pt003997_POPTR_ SLSKKIQHIVHSVRGMENKPQQSQT--
                ****:*****..**.:*:: :*.:
BoxShade v3.31 C (beta, 970507) Output
AT3G59470.1     - - M M M G I P V E L E V T T V E N H N E M G E S S G Q A M I E - - - - Q D D D N H N E L G E N S G E - - - - - Q D E K
pt003997_POPTR_    M K V I E I V D V V F A V D F I V D N D A N G D I A G N V A V D I A R A R D E - - - N E I V E N S V E G E F E Q Y D H K
 
AT3G59470.1     V D - - - - - L D S I P L A V A D M T E A Q G D E P Y V G Q E F E S E A A A H G F Y N A Y A T K V G F V I R V S K L S R
pt003997_POPTR_    M D K E S L A I D M I P D A V P A M S M V A A D E P Y M G Q E F D S E A S A H A F Y N A Y A T R I G F V I R V S K L S R
 
AT3G59470.1     S R H D G S P I G R Q L V C N K E G Y R L P S K R D K V I R Q R A E T R V G C K A M I L I R K E N S G K W V I T K F V K
pt003997_POPTR_    S R R D G S A I G R A L V C N K E G F R M P D K R E K I V R Q R A E T R V G C R A M I L V R K A S S G K W E V T K F V K
 
AT3G59470.1     E H N H S L M P G R V R R G C I Y D Q Y P N E H D K I Q E L M Q Q L A A E K K R A A T Y K R H L E M L F E Q I E Q H N E
pt003997_POPTR_    E H T H S L T P G K A R R D C I Y D Q Y P N E H D K I R E L S Q Q L A L E K K R A A T Y K R H L E L I F E Q I E E H N E
 
AT3G59470.1     S L S K R I Q H I V D N V R N L E Q R D H Q Q N H Q V
pt003997_POPTR_    S L S K K I Q H I V H S V R G M E N K P Q Q S Q T - -
 
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