fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G59470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041001 not found in 252aa AT3G59470.1 1st_1st 0.593320235 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G59470.1     MMMGIPVELEVTTVENH------------NEMGESSGQAMIEQ-DDDNHNELGENSGEQD
gm041001_Glyma1 MEFGIDASINGETVGNATIVQINSSTADGNKVGCSSFNPAYKQGHDDNITQ--DSSGG--
                * :** ..::  ** *             *::* ** :.  :* .*** .:  :.**   

AT3G59470.1     EKVDLDSIPLAVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRH
gm041001_Glyma1 -----DTIPSGIPAVSVASVDEPYVGQEFESEAAAHAFYNAYAKRVGFIIRVSKLSRSRR
                     *:** .:. :: *. ****************.******.:***:**********:

AT3G59470.1     DGSPIGRQLVCNKEGYRLPSKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHN
gm041001_Glyma1 DGTAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVITKFIMEHT
                **:.*** ****:****:*.**:*::**********:****:** .*********: **.

AT3G59470.1     HSLMPGRVRRGCIYDQYPNEHDKIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLS
gm041001_Glyma1 HPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIERKRSATYKRHLELIFEQIEEHNDSLS
                *.* **: **.***:*********:** **** *:**:********::*****:**:***

AT3G59470.1     KRIQHIVDNVRNLEQRDHQQNHQV
gm041001_Glyma1 KKIQHIVDSVKEMETKEQNQR---
                *:******.*:::* ::::*.
BoxShade v3.31 C (beta, 970507) Output
AT3G59470.1     M M M G I P V E L E V T T V E N H - - - - - - - - - - - - N E M G E S S G Q A M I E Q - D D D N H N E L G E N S G E Q D
gm041001_Glyma1    M E F G I D A S I N G E T V G N A T I V Q I N S S T A D G N K V G C S S F N P A Y K Q G H D D N I T Q - - D S S G G - -
 
AT3G59470.1     E K V D L D S I P L A V A D M T E A Q G D E P Y V G Q E F E S E A A A H G F Y N A Y A T K V G F V I R V S K L S R S R H
gm041001_Glyma1    - - - - - D T I P S G I P A V S V A S V D E P Y V G Q E F E S E A A A H A F Y N A Y A K R V G F I I R V S K L S R S R R
 
AT3G59470.1     D G S P I G R Q L V C N K E G Y R L P S K R D K V I R Q R A E T R V G C K A M I L I R K E N S G K W V I T K F V K E H N
gm041001_Glyma1    D G T A I G R A L V C N R E G Y R M P D K R E K I V R Q R A E T R V G C R A M I L V R K V S S G K W V I T K F I M E H T
 
AT3G59470.1     H S L M P G R V R R G C I Y D Q Y P N E H D K I Q E L M Q Q L A A E K K R A A T Y K R H L E M L F E Q I E Q H N E S L S
gm041001_Glyma1    H P L T P G K G R R D C I Y E Q Y P N E H D K I R E L S Q Q L A I E R K R S A T Y K R H L E L I F E Q I E E H N D S L S
 
AT3G59470.1     K R I Q H I V D N V R N L E Q R D H Q Q N H Q V
gm041001_Glyma1    K K I Q H I V D S V K E M E T K E Q N Q R - - -
 
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