fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60390.1 SERDDGLGLSLSLSLG at 6/315 in AT3G60390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029730 MERVEDLGLSLSLSSS in 68/363 AT2G44910.1 1st_not 0.508905852 II
Sb021157 DGDDNHLGLGLSLSLG in 88/511 AT3G60390.1 not_1st 0.506361323 II
YCPSSCLGLDLSFFFA in 435/511
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G60390.1     ----------------------------MSER------DDG-------------------
Sb029730_Sorbi1 ----------------------------MMERV-----ED--------------------
Sb021157_Sorbi1 NQDKTLPFLLTATPRTTPIINSSTVHLSLSTRVSRLQQEDGFVEKETKVQSDNRPSSMEM
                                            :  *      :*                    

AT3G60390.1     -----------------LGLSLSLSLGFNQ-------KDPSSRLN---------PM----
Sb029730_Sorbi1 -----------------LGLSLSLSSSLAS-----------PRTHHVATMLLRAP-----
Sb021157_Sorbi1 AVNARDEEKKYDGDDNHLGLGLSLSLGIATTAATPVEVDPPPRQQQQQRAISVAPISSLP
                                 ***.**** .:             .* :         *     

AT3G60390.1     -------PLASYASSSHMQHMQQS---NYNHPQKIQNTWINMFQSSERNS---DMRSFLR
Sb029730_Sorbi1 -------PEKRFL----------------------------------------EM-PLLL
Sb021157_Sorbi1 APQWWNGPAGLFFSPSSGMKMDPSLERKHQHQQQQQ-------QQAAATSYSHDM-PFLR
                       *   :                                         :* .:* 

AT3G60390.1     GIDVNRAPSTVVVDV-----EDEGAGVSSPNSTVSSVMSGKKSERELMAAAGAVGGGRVE
Sb029730_Sorbi1 PAKRSELATGEEGLR---------------------------------------------
Sb021157_Sorbi1 GIDVNRRATAGETRRGRSCSEDEEPGASSPNSTLSS-LSGKR-------AAPARSSGEVD
                  . .. .:                                                   

AT3G60390.1     ---DNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQK
Sb029730_Sorbi1 --------------GGGSDEEDG-GCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQK
Sb021157_Sorbi1 READGHTPRA---GGGGSDDEDS-GAG-GGSRKKLRLSKDQAAVLEDSFKEHNTLNPKQK
                              *****:**. * * ..*********:*: ***::*:** ****:**

AT3G60390.1     MALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRA
Sb029730_Sorbi1 AALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKEVQELRA
Sb021157_Sorbi1 AALAKQLNLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQREVAELRA
                 ***:**.*:.************************:******.**:*****::** ****

AT3G60390.1     LKL-SPHLYMHMKPPTTLTMCPSCERVAV---TSSSSSVAPPVMNSSSPMGPMSPWAAM-
Sb029730_Sorbi1 LKLVSPHLYMHMPPPTTLTMCPSCERVSSSNASNANSAAA------DRKAGAGVADGGAI
Sb021157_Sorbi1 LKLVAPHHYARMPPPTTLTMCPSCERLAS---APADEAVA------GRTAAPTGPWG---
                *** :** * :* *************::    : :..:.*      .   ..  . .   

AT3G60390.1     ----PLRQRP------AAGSH
Sb029730_Sorbi1 VCHRPIAVRP-------QQS-
Sb021157_Sorbi1 ----PLPVRPVFVDGPARRS-
                    *:  **         *
BoxShade v3.31 C (beta, 970507) Output
AT3G60390.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S E R - - - - - - D D G - - - - - - - - - - - - - - - - - - -
Sb029730_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M E R V - - - - - E D - - - - - - - - - - - - - - - - - - - -
Sb021157_Sorbi1    N Q D K T L P F L L T A T P R T T P I I N S S T V H L S L S T R V S R L Q Q E D G F V E K E T K V Q S D N R P S S M E M
 
AT3G60390.1     - - - - - - - - - - - - - - - - - L G L S L S L S L G F N Q - - - - - - - K D P S S R L N - - - - - - - - - P M - - - -
Sb029730_Sorbi1    - - - - - - - - - - - - - - - - - L G L S L S L S S S L A S - - - - - - - - - - - P R T H H V A T M L L R A P - - - - -
Sb021157_Sorbi1    A V N A R D E E K K Y D G D D N H L G L G L S L S L G I A T T A A T P V E V D P P P R Q Q Q Q Q R A I S V A P I S S L P
 
AT3G60390.1     - - - - - - - P L A S Y A S S S H M Q H M Q Q S - - - N Y N H P Q K I Q N T W I N M F Q S S E R N S - - - D M R S F L R
Sb029730_Sorbi1    - - - - - - - P E K R F L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E M - P L L L
Sb021157_Sorbi1    A P Q W W N G P A G L F F S P S S G M K M D P S L E R K H Q H Q Q Q Q Q - - - - - - - Q Q A A A T S Y S H D M - P F L R
 
AT3G60390.1     G I D V N R A P S T V V V D V - - - - - E D E G A G V S S P N S T V S S V M S G K K S E R E L M A A A G A V G G G R V E
Sb029730_Sorbi1    P A K R S E L A T G E E G L R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb021157_Sorbi1    G I D V N R R A T A G E T R R G R S C S E D E E P G A S S P N S T L S S - L S G K R - - - - - - - A A P A R S S G E V D
 
AT3G60390.1     - - - D N E I E R A S C S L G G G S D D E D G S G N G D D S S R K K L R L S K E Q A L V L E E T F K E H S T L N P K Q K
Sb029730_Sorbi1    - - - - - - - - - - - - - - G G G S D E E D G - G C G I D G S R K K L R L S K D Q S A V L E D S F R E H P T L N P R Q K
Sb021157_Sorbi1    R E A D G H T P R A - - - G G G G S D D E D S - G A G - G G S R K K L R L S K D Q A A V L E D S F K E H N T L N P K Q K
 
AT3G60390.1     M A L A K Q L N L R T R Q V E V W F Q N R R A R T K L K Q T E V D C E Y L K R C C E N L T D E N R R L Q K E V S E L R A
Sb029730_Sorbi1    A A L A Q Q L G L R P R Q V E V W F Q N R R A R T K L K Q T E V D C E Y L K R C C E T L T E E N R R L H K E V Q E L R A
Sb021157_Sorbi1    A A L A K Q L N L K P R Q V E V W F Q N R R A R T K L K Q T E V D C E F L K R C C E T L T E E N R R L Q R E V A E L R A
 
AT3G60390.1     L K L - S P H L Y M H M K P P T T L T M C P S C E R V A V - - - T S S S S S V A P P V M N S S S P M G P M S P W A A M -
Sb029730_Sorbi1    L K L V S P H L Y M H M P P P T T L T M C P S C E R V S S S N A S N A N S A A A - - - - - - D R K A G A G V A D G G A I
Sb021157_Sorbi1    L K L V A P H H Y A R M P P P T T L T M C P S C E R L A S - - - A P A D E A V A - - - - - - G R T A A P T G P W G - - -
 
AT3G60390.1     - - - - P L R Q R P - - - - - - A A G S H
Sb029730_Sorbi1    V C H R P I A V R P - - - - - - - Q Q S -
Sb021157_Sorbi1    - - - - P L P V R P V F V D G P A R R S -
 
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