fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60390.1 SERDDGLGLSLSLSLG at 6/315 in AT3G60390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018184 GEKDDGLGLGLSLKLG in 7/308 AT3G60390.1 1st_1st 0.605597964 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60390.1     MSERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYN-H--PQKIQN
gm018184_Glyma0 MGEKDDGLGLGLSLKLGWGENNDNN----------------NNQQQHPFNVHKPPQSVPN
                *.*:******.***.**:.::: ..                :: **  :* *  **.: *

AT3G60390.1     TWI---NMFQSSERNSDMRSFLRGIDVN---RAPSTVVVDVEDEGAGVSSPNSTVSSVMS
gm018184_Glyma0 QRVSVNSLFHFHDRSSEMRSFFRGIDVNLPPPPPSAALAAFDDEN-GVSSPNSTISSI-S
                  :   .:*:  :*.*:****:******    .**:.:. .:**. ********:**: *

AT3G60390.1     GKKSERELMAAAGAVGGGRVEDNEIERASCSLGGG--SDDEDGSGNGD---DSSRKKLRL
gm018184_Glyma0 GKRSERE----------GNGEEN--ERTSSSRGGGGSDDDEGGACGGDADADASRKKLRL
                **:****          *. *:*  **:*.* ***  .***.*: .**   *:*******

AT3G60390.1     SKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYL
gm018184_Glyma0 SKEQALVLEETFKEHNTLNPKQKQALAKQLNLMPRQVEVWFQNRRARTKLKQTEVDCEYL
                ***************.******* ******** .**************************

AT3G60390.1     KRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVA-
gm018184_Glyma0 KRCCENLTEENRRLQKEVQELRALKLSPHLYMQMNPPTTLTMCPSCERVAVSSASSSSSA
                ********:*********.*************:*:****************:*:*** : 

AT3G60390.1     ------PPVMNSSSPMG-------PMSPWAAM--PLRQRPAAGSH
gm018184_Glyma0 TMPSALPPA--NLNPVGPTIQRPMPVNPWAAMLNQHRGRP-----
                      **.  . .*:*       *:.*****    * **
BoxShade v3.31 C (beta, 970507) Output
AT3G60390.1     M S E R D D G L G L S L S L S L G F N Q K D P S S R L N P M P L A S Y A S S S H M Q H M Q Q S N Y N - H - - P Q K I Q N
gm018184_Glyma0    M G E K D D G L G L G L S L K L G W G E N N D N N - - - - - - - - - - - - - - - - N N Q Q Q H P F N V H K P P Q S V P N
 
AT3G60390.1     T W I - - - N M F Q S S E R N S D M R S F L R G I D V N - - - R A P S T V V V D V E D E G A G V S S P N S T V S S V M S
gm018184_Glyma0    Q R V S V N S L F H F H D R S S E M R S F F R G I D V N L P P P P P S A A L A A F D D E N - G V S S P N S T I S S I - S
 
AT3G60390.1     G K K S E R E L M A A A G A V G G G R V E D N E I E R A S C S L G G G - - S D D E D G S G N G D - - - D S S R K K L R L
gm018184_Glyma0    G K R S E R E - - - - - - - - - - G N G E E N - - E R T S S S R G G G G S D D D E G G A C G G D A D A D A S R K K L R L
 
AT3G60390.1     S K E Q A L V L E E T F K E H S T L N P K Q K M A L A K Q L N L R T R Q V E V W F Q N R R A R T K L K Q T E V D C E Y L
gm018184_Glyma0    S K E Q A L V L E E T F K E H N T L N P K Q K Q A L A K Q L N L M P R Q V E V W F Q N R R A R T K L K Q T E V D C E Y L
 
AT3G60390.1     K R C C E N L T D E N R R L Q K E V S E L R A L K L S P H L Y M H M K P P T T L T M C P S C E R V A V T S S S S S V A -
gm018184_Glyma0    K R C C E N L T E E N R R L Q K E V Q E L R A L K L S P H L Y M Q M N P P T T L T M C P S C E R V A V S S A S S S S S A
 
AT3G60390.1     - - - - - - P P V M N S S S P M G - - - - - - - P M S P W A A M - - P L R Q R P A A G S H
gm018184_Glyma0    T M P S A L P P A - - N L N P V G P T I Q R P M P V N P W A A M L N Q H R G R P - - - - -
 
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