fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017824 not found in 303aa AT3G60460.1 not_1st 0.492805755 II
Pt016897 not found in 303aa AT3G60460.1 not_1st 0.492805755 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G60460.1     MEA-KKEEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRP
pt017824_POPTR_ MEGFKKEEIRKGPWKEEEDEVLINHVKKYGPRDWSSIRSKGLLHRTGKSCRLRWVNKLRP
pt016897_POPTR_ MEGFKKEEIRKGPWKEEEDEVLINHVKKYGPRDWSSIRSKGLLHRTGKSCRLRWVNKLRP
                **. *****:***** ***********:***************:****************

AT3G60460.1     NLKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILHNS
pt017824_POPTR_ NLKNGCKFSAEEERVVIDLQAEIGNRWARIATYLPGRTDNDVKNFWSSRQKRLARILQ-T
pt016897_POPTR_ NLKNGCKFSAEEERVVIDLQAEIGNRWARIATYLPGRTDNDVKNFWSSRQKRLARILQ-T
                **********:***.**:**:*:**:*******************************: :

AT3G60460.1     SDASSSSFNPKSSSSHRLKGKNVKPIRQSSQGF------GLVEEEVTVSSSCSQMVPYSS
pt017824_POPTR_ SGTPPSSFNSKQQRS-----KNKVPVFLDVPTFEAPMFSSSMEEELS-SKACSSSYLENP
pt016897_POPTR_ SGTPPSSFNSKQQRS-----KNKVPVFLDVPTFEAPMFSSSMEEEVS-SKACSSSYLENP
                *.:..****.*.. *     **  *:  .   *      . :***:: *.:**.    ..

AT3G60460.1     DQVGDEVLRLPDLGVKLEHQPFAFGTDLVLAEYSDSQNDANQQAISP-----FSPESREL
pt017824_POPTR_ EQI--RMMPLPPL-VKSELP----GCDANLVQYEPMSGIPFPQIPQPQPDLVFSPESHEL
pt016897_POPTR_ EQI--RMMPLPPL-VKSELP----GCDANLVQYEPMSGIPFPQIPQPQPDLVFSPESHEL
                :*:  .:: ** * ** *      * *  *.:*.  .. .  *  .*     *****:**

AT3G60460.1     LARLDDPFYYDILGPADSSE----PLFALPQPFFEPSPVPRRCRHVSKDEE----ADVFL
pt017824_POPTR_ LARLDDPYFLNVLGTIDAPELGDTAQFSLGPPLFDPV---SSCMNSPSDVKNPVTPDTLF
pt016897_POPTR_ LARLDDPYFLNVLGTIDAPELGDTAQFSLGPPLFDPV---SSCMNSPSDVKNPVTPDTLF
                *******:: ::**. *:.*    . *:*  *:*:*      * : ..* :    .*.::

AT3G60460.1     DDFPADMFDQVDPIPSP---
pt017824_POPTR_ DELPPDMFDHIEPFPSPSEW
pt016897_POPTR_ DELPPDMFDHIEPFPSPSEW
                *::*.****:::*:***
BoxShade v3.31 C (beta, 970507) Output
AT3G60460.1     M E A - K K E E I K K G P W K A E E D E V L I N H V K R Y G P R D W S S I R S K G L L Q R T G K S C R L R W V N K L R P
pt017824_POPTR_    M E G F K K E E I R K G P W K E E E D E V L I N H V K K Y G P R D W S S I R S K G L L H R T G K S C R L R W V N K L R P
pt016897_POPTR_    M E G F K K E E I R K G P W K E E E D E V L I N H V K K Y G P R D W S S I R S K G L L H R T G K S C R L R W V N K L R P
 
AT3G60460.1     N L K N G C K F S A D E E R T V I E L Q S E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A R I L H N S
pt017824_POPTR_    N L K N G C K F S A E E E R V V I D L Q A E I G N R W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A R I L Q - T
pt016897_POPTR_    N L K N G C K F S A E E E R V V I D L Q A E I G N R W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A R I L Q - T
 
AT3G60460.1     S D A S S S S F N P K S S S S H R L K G K N V K P I R Q S S Q G F - - - - - - G L V E E E V T V S S S C S Q M V P Y S S
pt017824_POPTR_    S G T P P S S F N S K Q Q R S - - - - - K N K V P V F L D V P T F E A P M F S S S M E E E L S - S K A C S S S Y L E N P
pt016897_POPTR_    S G T P P S S F N S K Q Q R S - - - - - K N K V P V F L D V P T F E A P M F S S S M E E E V S - S K A C S S S Y L E N P
 
AT3G60460.1     D Q V G D E V L R L P D L G V K L E H Q P F A F G T D L V L A E Y S D S Q N D A N Q Q A I S P - - - - - F S P E S R E L
pt017824_POPTR_    E Q I - - R M M P L P P L - V K S E L P - - - - G C D A N L V Q Y E P M S G I P F P Q I P Q P Q P D L V F S P E S H E L
pt016897_POPTR_    E Q I - - R M M P L P P L - V K S E L P - - - - G C D A N L V Q Y E P M S G I P F P Q I P Q P Q P D L V F S P E S H E L
 
AT3G60460.1     L A R L D D P F Y Y D I L G P A D S S E - - - - P L F A L P Q P F F E P S P V P R R C R H V S K D E E - - - - A D V F L
pt017824_POPTR_    L A R L D D P Y F L N V L G T I D A P E L G D T A Q F S L G P P L F D P V - - - S S C M N S P S D V K N P V T P D T L F
pt016897_POPTR_    L A R L D D P Y F L N V L G T I D A P E L G D T A Q F S L G P P L F D P V - - - S S C M N S P S D V K N P V T P D T L F
 
AT3G60460.1     D D F P A D M F D Q V D P I P S P - - -
pt017824_POPTR_    D E L P P D M F D H I E P F P S P S E W
pt016897_POPTR_    D E L P P D M F D H I E P F P S P S E W
 
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