fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018197 not found in 307aa AT3G60460.1 1st_1st 0.447841726 Ia
Pt039609 not found in 308aa AT3G60460.1 1st_1st 0.5 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G60460.1     ------MEA-KKEE---IKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCR
pt039609_POPTR_ MPSIRKMEGFKKEE---IRKGPWKAEEDEVLIMHVKKYGPRDWSSIRSKGLLQRTGKSCR
gm018197_Glyma0 ------MHG-KKEQEEYIRKGPWKAEEDEMLLKHVKKYGPRDWSSIRSKGLLQRTGKSCR
                      *.. ***:   *:**********:*: ***:***********************

AT3G60460.1     LRWVNKLRPNLKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQK
pt039609_POPTR_ LRWVNKLRPNLKHGCKFSAEEERVVIDLQAEFGNKWARIATYLPGRTDNDVKNFWSSRQK
gm018197_Glyma0 LRWVNKLRPNLKNGCKFSLEEERVVIELQAQFGNRWAKIASYLPGRTDNDVKNFWSSRQK
                ************:***** :***.**:**::***:**:**:*******************

AT3G60460.1     RLARILHNSSDASSSSFNPKSSSSHRLKGKNVKPIRQ-----SSQGFGLVEEEVTVSSSC
pt039609_POPTR_ RLARILQTSGTPSSSNSRPQ-------KSKYEVPVFQDVPTLEAPMFSSSMEEESSSKAC
gm018197_Glyma0 RLARILQTSATPKSQ------------KNKTRVPSLHDVPILQVIGF-------------
                ******:.*. ..*.            *.*   *  :     .   *             

AT3G60460.1     SQMVPYSSDQVG-----------DEVLRLPDLGVKLEHQPFAFGTDL-----VLAEYSDS
pt039609_POPTR_ SSSYLDNPEHI-------------RMMPLPSL-VKTDF-PDGYAN--------LGQYEPL
gm018197_Glyma0 -ERFLYSGLFIVIPFCFFLLNSVIKMVSLPDL-IKSEL-PSSDTIHVEQEFTLFENYKST
                 .    .   :             .:: **.* :* :  * .           : :*.  

AT3G60460.1     QNDANQQAISP-----FSPESRELLARLDDPFYYDILGPADSSE----PLFALPQPFFEP
pt039609_POPTR_ STIPFPQIPQPQPGLLFSPESHELLARLDDPYFLNVLGTADAPELGDAAQFSLGPPLFDP
gm018197_Glyma0 EQIAFPQIPELQNGLTFSMENQDLLPTIDEPCFIEELCPLDASEFGIGPQHPIGFPFFQP
                .  .  *  .      ** *.::**. :*:* : : * . *:.*    . ..:  *:*:*

AT3G60460.1     SPVPRRCRHVSKD-EE----ADVFLDDFPADMFDQVDPIPSP---
pt039609_POPTR_ V---SSCMNSATD-VKNHVTPDTLFDEFPSDMFDHIEPLPSPSEW
gm018197_Glyma0 ---PGSCRLGTGDAIDNSKISDSFFDDFPVDMFDHMDPPASPSNL
                      *   : *  .    .* ::*:** ****:::* .**
BoxShade v3.31 C (beta, 970507) Output
AT3G60460.1     - - - - - - M E A - K K E E - - - I K K G P W K A E E D E V L I N H V K R Y G P R D W S S I R S K G L L Q R T G K S C R
pt039609_POPTR_    M P S I R K M E G F K K E E - - - I R K G P W K A E E D E V L I M H V K K Y G P R D W S S I R S K G L L Q R T G K S C R
gm018197_Glyma0    - - - - - - M H G - K K E Q E E Y I R K G P W K A E E D E M L L K H V K K Y G P R D W S S I R S K G L L Q R T G K S C R
 
AT3G60460.1     L R W V N K L R P N L K N G C K F S A D E E R T V I E L Q S E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K
pt039609_POPTR_    L R W V N K L R P N L K H G C K F S A E E E R V V I D L Q A E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K
gm018197_Glyma0    L R W V N K L R P N L K N G C K F S L E E E R V V I E L Q A Q F G N R W A K I A S Y L P G R T D N D V K N F W S S R Q K
 
AT3G60460.1     R L A R I L H N S S D A S S S S F N P K S S S S H R L K G K N V K P I R Q - - - - - S S Q G F G L V E E E V T V S S S C
pt039609_POPTR_    R L A R I L Q T S G T P S S S N S R P Q - - - - - - - K S K Y E V P V F Q D V P T L E A P M F S S S M E E E S S S K A C
gm018197_Glyma0    R L A R I L Q T S A T P K S Q - - - - - - - - - - - - K N K T R V P S L H D V P I L Q V I G F - - - - - - - - - - - - -
 
AT3G60460.1     S Q M V P Y S S D Q V G - - - - - - - - - - - D E V L R L P D L G V K L E H Q P F A F G T D L - - - - - V L A E Y S D S
pt039609_POPTR_    S S S Y L D N P E H I - - - - - - - - - - - - - R M M P L P S L - V K T D F - P D G Y A N - - - - - - - - L G Q Y E P L
gm018197_Glyma0    - E R F L Y S G L F I V I P F C F F L L N S V I K M V S L P D L - I K S E L - P S S D T I H V E Q E F T L F E N Y K S T
 
AT3G60460.1     Q N D A N Q Q A I S P - - - - - F S P E S R E L L A R L D D P F Y Y D I L G P A D S S E - - - - P L F A L P Q P F F E P
pt039609_POPTR_    S T I P F P Q I P Q P Q P G L L F S P E S H E L L A R L D D P Y F L N V L G T A D A P E L G D A A Q F S L G P P L F D P
gm018197_Glyma0    E Q I A F P Q I P E L Q N G L T F S M E N Q D L L P T I D E P C F I E E L C P L D A S E F G I G P Q H P I G F P F F Q P
 
AT3G60460.1     S P V P R R C R H V S K D - E E - - - - A D V F L D D F P A D M F D Q V D P I P S P - - -
pt039609_POPTR_    V - - - S S C M N S A T D - V K N H V T P D T L F D E F P S D M F D H I E P L P S P S E W
gm018197_Glyma0    - - - P G S C R L G T G D A I D N S K I S D S F F D D F P V D M F D H M D P P A S P S N L
 
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