fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039609 not found in 308aa AT3G60460.1 1st_1st 0.5 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60460.1     ------MEA-KKEEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRW
pt039609_POPTR_ MPSIRKMEGFKKEEIRKGPWKAEEDEVLIMHVKKYGPRDWSSIRSKGLLQRTGKSCRLRW
                      **. *****:************* ***:**************************

AT3G60460.1     VNKLRPNLKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLA
pt039609_POPTR_ VNKLRPNLKHGCKFSAEEERVVIDLQAEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLA
                *********:******:***.**:**:*********************************

AT3G60460.1     RILHNSSDASSSSFNPKSSSSHRLKGKNVKPIRQ-----SSQGFGLVEEEVTVSSSCSQM
pt039609_POPTR_ RILQTSGTPSSSNSRPQ-------KSKYEVPVFQDVPTLEAPMFSSSMEEESSSKACSSS
                ***:.*. .***. .*:       *.*   *: *     .:  *.   ** : *.:**. 

AT3G60460.1     VPYSSDQVGDEVLRLPDLGVKLEHQPFAFGTDLVLAEYSDSQNDANQQAISP-----FSP
pt039609_POPTR_ YLDNPEHI--RMMPLPSL-VKTDF-PDGYAN---LGQYEPLSTIPFPQIPQPQPGLLFSP
                   ..:::  .:: **.* ** :. * .:..   *.:*.  .. .  *  .*     ***

AT3G60460.1     ESRELLARLDDPFYYDILGPADSSE----PLFALPQPFFEPSPVPRRCRHVSKDEE----
pt039609_POPTR_ ESHELLARLDDPYFLNVLGTADAPELGDAAQFSLGPPLFDPV---SSCMNSATDVKNHVT
                **:*********:: ::**.**:.*    . *:*  *:*:*      * : :.* :    

AT3G60460.1     ADVFLDDFPADMFDQVDPIPSP---
pt039609_POPTR_ PDTLFDEFPSDMFDHIEPLPSPSEW
                .*.::*:**:****:::*:***
BoxShade v3.31 C (beta, 970507) Output
AT3G60460.1     - - - - - - M E A - K K E E I K K G P W K A E E D E V L I N H V K R Y G P R D W S S I R S K G L L Q R T G K S C R L R W
pt039609_POPTR_    M P S I R K M E G F K K E E I R K G P W K A E E D E V L I M H V K K Y G P R D W S S I R S K G L L Q R T G K S C R L R W
 
AT3G60460.1     V N K L R P N L K N G C K F S A D E E R T V I E L Q S E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A
pt039609_POPTR_    V N K L R P N L K H G C K F S A E E E R V V I D L Q A E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A
 
AT3G60460.1     R I L H N S S D A S S S S F N P K S S S S H R L K G K N V K P I R Q - - - - - S S Q G F G L V E E E V T V S S S C S Q M
pt039609_POPTR_    R I L Q T S G T P S S S N S R P Q - - - - - - - K S K Y E V P V F Q D V P T L E A P M F S S S M E E E S S S K A C S S S
 
AT3G60460.1     V P Y S S D Q V G D E V L R L P D L G V K L E H Q P F A F G T D L V L A E Y S D S Q N D A N Q Q A I S P - - - - - F S P
pt039609_POPTR_    Y L D N P E H I - - R M M P L P S L - V K T D F - P D G Y A N - - - L G Q Y E P L S T I P F P Q I P Q P Q P G L L F S P
 
AT3G60460.1     E S R E L L A R L D D P F Y Y D I L G P A D S S E - - - - P L F A L P Q P F F E P S P V P R R C R H V S K D E E - - - -
pt039609_POPTR_    E S H E L L A R L D D P Y F L N V L G T A D A P E L G D A A Q F S L G P P L F D P V - - - S S C M N S A T D V K N H V T
 
AT3G60460.1     A D V F L D D F P A D M F D Q V D P I P S P - - -
pt039609_POPTR_    P D T L F D E F P S D M F D H I E P L P S P S E W
 
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