fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039609 not found in 308aa AT3G60460.1 1st_1st 0.5 Ia
Pt017824 not found in 303aa AT3G60460.1 not_1st 0.492805755 II
Pt016897 not found in 303aa AT3G60460.1 not_1st 0.492805755 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G60460.1     ------MEA-KKEEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRW
pt017824_POPTR_ ------MEGFKKEEIRKGPWKEEEDEVLINHVKKYGPRDWSSIRSKGLLHRTGKSCRLRW
pt039609_POPTR_ MPSIRKMEGFKKEEIRKGPWKAEEDEVLIMHVKKYGPRDWSSIRSKGLLQRTGKSCRLRW
pt016897_POPTR_ ------MEGFKKEEIRKGPWKEEEDEVLINHVKKYGPRDWSSIRSKGLLHRTGKSCRLRW
                      **. *****:***** ******* ***:***************:**********

AT3G60460.1     VNKLRPNLKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLA
pt017824_POPTR_ VNKLRPNLKNGCKFSAEEERVVIDLQAEIGNRWARIATYLPGRTDNDVKNFWSSRQKRLA
pt039609_POPTR_ VNKLRPNLKHGCKFSAEEERVVIDLQAEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLA
pt016897_POPTR_ VNKLRPNLKNGCKFSAEEERVVIDLQAEIGNRWARIATYLPGRTDNDVKNFWSSRQKRLA
                *********:******:***.**:**:*:**:****************************

AT3G60460.1     RILHNSSDASSSSFNPKSS-SSHRLKGKNVKPIRQ-----SSQGFGLVEEEVTVSSSCSQ
pt017824_POPTR_ RILQTSG-------TPPSSFNSKQQRSKNKVPVFLDVPTFEAPMFSSSMEEELSSKACSS
pt039609_POPTR_ RILQTSG-------TPSSS-NSRPQKSKYEVPVFQDVPTLEAPMFSSSMEEESSSKACSS
pt016897_POPTR_ RILQTSG-------TPPSSFNSKQQRSKNKVPVFLDVPTFEAPMFSSSMEEEVSSKACSS
                ***:.*.       .* ** .*:  :.*   *:       .:  *.   **   *.:**.

AT3G60460.1     MVPYSSDQVGDEVLRLPDLGVKLEHQPFAFGTDLVLAEYSDSQNDANQQAISP-----FS
pt017824_POPTR_ SYLENPEQI--RMMPLPPL-VKSELP----GCDANLVQYEPMSGIPFPQIPQPQPDLVFS
pt039609_POPTR_ SYLDNPEHI--RMMPLPSL-VKTDFP----DGYANLGQYEPLSTIPFPQIPQPQPGLLFS
pt016897_POPTR_ SYLENPEQI--RMMPLPPL-VKSELP----GCDANLVQYEPMSGIPFPQIPQPQPDLVFS
                    ..:::  .:: ** * ** :      .    * :*.  .  .  *  .*     **

AT3G60460.1     PESRELLARLDDPFYYDILGPADSSE----PLFALPQPFFEPSPVPRRCRHVSKDEE---
pt017824_POPTR_ PESHELLARLDDPYFLNVLGTIDAPELGDTAQFSLGPPLFDPV---SSCMNSPSDVKNPV
pt039609_POPTR_ PESHELLARLDDPYFLNVLGTADAPELGDAAQFSLGPPLFDPV---SSCMNSATDVKNHV
pt016897_POPTR_ PESHELLARLDDPYFLNVLGTIDAPELGDTAQFSLGPPLFDPV---SSCMNSPSDVKNPV
                ***:*********:: ::**. *:.*    . *:*  *:*:*      * : ..* :   

AT3G60460.1     -ADVFLDDFPADMFDQVDPIPSP---
pt017824_POPTR_ TPDTLFDELPPDMFDHIEPFPSPSEW
pt039609_POPTR_ TPDTLFDEFPSDMFDHIEPLPSPSEW
pt016897_POPTR_ TPDTLFDELPPDMFDHIEPFPSPSEW
                 .*.::*::*.****:::*:***
BoxShade v3.31 C (beta, 970507) Output
AT3G60460.1     - - - - - - M E A - K K E E I K K G P W K A E E D E V L I N H V K R Y G P R D W S S I R S K G L L Q R T G K S C R L R W
pt017824_POPTR_    - - - - - - M E G F K K E E I R K G P W K E E E D E V L I N H V K K Y G P R D W S S I R S K G L L H R T G K S C R L R W
pt039609_POPTR_    M P S I R K M E G F K K E E I R K G P W K A E E D E V L I M H V K K Y G P R D W S S I R S K G L L Q R T G K S C R L R W
pt016897_POPTR_    - - - - - - M E G F K K E E I R K G P W K E E E D E V L I N H V K K Y G P R D W S S I R S K G L L H R T G K S C R L R W
 
AT3G60460.1     V N K L R P N L K N G C K F S A D E E R T V I E L Q S E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A
pt017824_POPTR_    V N K L R P N L K N G C K F S A E E E R V V I D L Q A E I G N R W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A
pt039609_POPTR_    V N K L R P N L K H G C K F S A E E E R V V I D L Q A E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A
pt016897_POPTR_    V N K L R P N L K N G C K F S A E E E R V V I D L Q A E I G N R W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A
 
AT3G60460.1     R I L H N S S D A S S S S F N P K S S - S S H R L K G K N V K P I R Q - - - - - S S Q G F G L V E E E V T V S S S C S Q
pt017824_POPTR_    R I L Q T S G - - - - - - - T P P S S F N S K Q Q R S K N K V P V F L D V P T F E A P M F S S S M E E E L S S K A C S S
pt039609_POPTR_    R I L Q T S G - - - - - - - T P S S S - N S R P Q K S K Y E V P V F Q D V P T L E A P M F S S S M E E E S S S K A C S S
pt016897_POPTR_    R I L Q T S G - - - - - - - T P P S S F N S K Q Q R S K N K V P V F L D V P T F E A P M F S S S M E E E V S S K A C S S
 
AT3G60460.1     M V P Y S S D Q V G D E V L R L P D L G V K L E H Q P F A F G T D L V L A E Y S D S Q N D A N Q Q A I S P - - - - - F S
pt017824_POPTR_    S Y L E N P E Q I - - R M M P L P P L - V K S E L P - - - - G C D A N L V Q Y E P M S G I P F P Q I P Q P Q P D L V F S
pt039609_POPTR_    S Y L D N P E H I - - R M M P L P S L - V K T D F P - - - - D G Y A N L G Q Y E P L S T I P F P Q I P Q P Q P G L L F S
pt016897_POPTR_    S Y L E N P E Q I - - R M M P L P P L - V K S E L P - - - - G C D A N L V Q Y E P M S G I P F P Q I P Q P Q P D L V F S
 
AT3G60460.1     P E S R E L L A R L D D P F Y Y D I L G P A D S S E - - - - P L F A L P Q P F F E P S P V P R R C R H V S K D E E - - -
pt017824_POPTR_    P E S H E L L A R L D D P Y F L N V L G T I D A P E L G D T A Q F S L G P P L F D P V - - - S S C M N S P S D V K N P V
pt039609_POPTR_    P E S H E L L A R L D D P Y F L N V L G T A D A P E L G D A A Q F S L G P P L F D P V - - - S S C M N S A T D V K N H V
pt016897_POPTR_    P E S H E L L A R L D D P Y F L N V L G T I D A P E L G D T A Q F S L G P P L F D P V - - - S S C M N S P S D V K N P V
 
AT3G60460.1     - A D V F L D D F P A D M F D Q V D P I P S P - - -
pt017824_POPTR_    T P D T L F D E L P P D M F D H I E P F P S P S E W
pt039609_POPTR_    T P D T L F D E F P S D M F D H I E P L P S P S E W
pt016897_POPTR_    T P D T L F D E L P P D M F D H I E P F P S P S E W
 
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