fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018197 not found in 307aa AT3G60460.1 1st_1st 0.447841726 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60460.1     MEAKKEE---IKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKL
gm018197_Glyma0 MHGKKEQEEYIRKGPWKAEEDEMLLKHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKL
                *..***:   *:**********:*::***:******************************

AT3G60460.1     RPNLKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILH
gm018197_Glyma0 RPNLKNGCKFSLEEERVVIELQAQFGNRWAKIASYLPGRTDNDVKNFWSSRQKRLARILQ
                *********** :***.*****::***:**:**:*************************:

AT3G60460.1     NSSDASSSSFNPKSSSSHRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQMVPYSSDQVG
gm018197_Glyma0 TSATPKSQKNKTRVPSLHDV------PILQVI-GF-----ERFLYSGLFIVIPFCFFLLN
                .*: ..*.. :.: .* * :      ** *   **     *  : *.   ::*:.   :.

AT3G60460.1     D--EVLRLPDLGVKLEHQPFAFGTDLVLAEYSDSQNDANQQAIS-----------PFSPE
gm018197_Glyma0 SVIKMVSLPDL---IKSELPSSDTIHVEQEFTLFENYKSTEQIAFPQIPELQNGLTFSME
                .  ::: ****   :: :  : .*  *  *::  :*  . : *:           .** *

AT3G60460.1     SRELLARLDDPFYYDILGPADSSEPLFAL-PQ-----PFFEPSPVPRRCR-----HVSKD
gm018197_Glyma0 NQDLLPTIDEPCFIEELCPLDASE--FGIGPQHPIGFPFFQP---PGSCRLGTGDAIDNS
                .::**. :*:* : : * * *:**  *.: **     ***:*   *  **      :.:.

AT3G60460.1     EEADVFLDDFPADMFDQVDPIPSP---
gm018197_Glyma0 KISDSFFDDFPVDMFDHMDPPASPSNL
                : :* *:****.****::** .**
BoxShade v3.31 C (beta, 970507) Output
AT3G60460.1     M E A K K E E - - - I K K G P W K A E E D E V L I N H V K R Y G P R D W S S I R S K G L L Q R T G K S C R L R W V N K L
gm018197_Glyma0    M H G K K E Q E E Y I R K G P W K A E E D E M L L K H V K K Y G P R D W S S I R S K G L L Q R T G K S C R L R W V N K L
 
AT3G60460.1     R P N L K N G C K F S A D E E R T V I E L Q S E F G N K W A R I A T Y L P G R T D N D V K N F W S S R Q K R L A R I L H
gm018197_Glyma0    R P N L K N G C K F S L E E E R V V I E L Q A Q F G N R W A K I A S Y L P G R T D N D V K N F W S S R Q K R L A R I L Q
 
AT3G60460.1     N S S D A S S S S F N P K S S S S H R L K G K N V K P I R Q S S Q G F G L V E E E V T V S S S C S Q M V P Y S S D Q V G
gm018197_Glyma0    T S A T P K S Q K N K T R V P S L H D V - - - - - - P I L Q V I - G F - - - - - E R F L Y S G L F I V I P F C F F L L N
 
AT3G60460.1     D - - E V L R L P D L G V K L E H Q P F A F G T D L V L A E Y S D S Q N D A N Q Q A I S - - - - - - - - - - - P F S P E
gm018197_Glyma0    S V I K M V S L P D L - - - I K S E L P S S D T I H V E Q E F T L F E N Y K S T E Q I A F P Q I P E L Q N G L T F S M E
 
AT3G60460.1     S R E L L A R L D D P F Y Y D I L G P A D S S E P L F A L - P Q - - - - - P F F E P S P V P R R C R - - - - - H V S K D
gm018197_Glyma0    N Q D L L P T I D E P C F I E E L C P L D A S E - - F G I G P Q H P I G F P F F Q P - - - P G S C R L G T G D A I D N S
 
AT3G60460.1     E E A D V F L D D F P A D M F D Q V D P I P S P - - -
gm018197_Glyma0    K I S D S F F D D F P V D M F D H M D P P A S P S N L
 
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