fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000882 not found in 263aa AT2G44940.1 1st_not 0.430809399 II
Pt016119 not found in 269aa AT2G44940.1 1st_not 0.456919060 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G60490.1     MGKQINIESSATHHQDNIVSVITATISSSSVVTSSSDSWSTSKRSLV-------------
pt016119_POPTR_ MEKHIILEIDA---QDNSLTSSSTSTTTTTTTTSSSSSSFSTTISYTDRISKKEENSIAD
gm000882_Glyma0 ------MESDA---GENLFGTFSSSTTSITASSSSSPTSSTTTSSNS---CTKHDSKISP
                      :* .*    :* .   ::: :: :. :*** :  ::. *               

AT3G60490.1     ----------QDNDSGG-KRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIW
pt016119_POPTR_ PKGSRKSQELQSGNEGN-KKRKTTRNENNGKHPTYRGVRMRSWGKWVCEIREPRKKSRIW
gm000882_Glyma0 P---------QNQNTPNSKKRQRSDDNENKHHPSYRGVRMRAWGKWVSEIREPRKKSRIW
                          *. :  . *:*: . .::* : .:*******:*****.************

AT3G60490.1     LGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATT
pt016119_POPTR_ LGTYPTAEMAARAHDVAALAIKGGSAYLNFPELVDELPRPLSKSPKDIQAAAAKAAAASF
gm000882_Glyma0 LGTYPTAEMAARAHDVAALAVKGHSAFLNFPNLAQDLPRPTTTSPKDIQAAAAKAATTTF
                ********************:** *.:****:*   **** : *********:*** :: 

AT3G60490.1     WHKPVIDKKLAD-----ELSHSELLSTAQSSTSSSFVFSSD--------------TSETS
pt016119_POPTR_ PE---TRHCEAEAEAEADMSHAEL----NVSNLSDNLAMDN--------------IQESS
gm000882_Glyma0 FDDEIVNHCQAE---KAEQNHGEQ----QASP-STLCMMDNSTEAEQIQAEQASSTQESS
                 .     :  *:     : .*.*     : *  *     .:               .*:*

AT3G60490.1     STDKESNEETVFDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEEDVGFRFEEPFNWQND
pt016119_POPTR_ SSPSTDVDDKLFDLPDLFIDGV-NHSDGFCYYSP--PWQLCS-ADTGFRLEEPFLWEY-
gm000882_Glyma0 SSHSTADEETLFDLPDLFPDG----NSGLFSYSS--CWHLCA-VDSGFRLEEQFLWENF
                *: .   ::.:******* **    ...:   .    *:* .  * ***:** * *:
BoxShade v3.31 C (beta, 970507) Output
AT3G60490.1     M G K Q I N I E S S A T H H Q D N I V S V I T A T I S S S S V V T S S S D S W S T S K R S L V - - - - - - - - - - - - -
pt016119_POPTR_    M E K H I I L E I D A - - - Q D N S L T S S S T S T T T T T T T T S S S S S S F S T T I S Y T D R I S K K E E N S I A D
gm000882_Glyma0    - - - - - - M E S D A - - - G E N L F G T F S S S T T S I T A S S S S S P T S S T T T S S N S - - - C T K H D S K I S P
 
AT3G60490.1     - - - - - - - - - - Q D N D S G G - K R R K S N V S D D N K N P T S Y R G V R M R S W G K W V S E I R E P R K K S R I W
pt016119_POPTR_    P K G S R K S Q E L Q S G N E G N - K K R K T T R N E N N G K H P T Y R G V R M R S W G K W V C E I R E P R K K S R I W
gm000882_Glyma0    P - - - - - - - - - Q N Q N T P N S K K R Q R S D D N E N K H H P S Y R G V R M R A W G K W V S E I R E P R K K S R I W
 
AT3G60490.1     L G T Y P T A E M A A R A H D V A A L A I K G N S G F L N F P E L S G L L P R P V S C S P K D I Q A A A T K A A E A T T
pt016119_POPTR_    L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E L V D E L P R P L S K S P K D I Q A A A A K A A A A S F
gm000882_Glyma0    L G T Y P T A E M A A R A H D V A A L A V K G H S A F L N F P N L A Q D L P R P T T T S P K D I Q A A A A K A A T T T F
 
AT3G60490.1     W H K P V I D K K L A D - - - - - E L S H S E L L S T A Q S S T S S S F V F S S D - - - - - - - - - - - - - - T S E T S
pt016119_POPTR_    P E - - - T R H C E A E A E A E A D M S H A E L - - - - N V S N L S D N L A M D N - - - - - - - - - - - - - - I Q E S S
gm000882_Glyma0    F D D E I V N H C Q A E - - - K A E Q N H G E Q - - - - Q A S P - S T L C M M D N S T E A E Q I Q A E Q A S S T Q E S S
 
AT3G60490.1     S T D K E S N E E T V F D L P D L F T D G L M N P N D A F C L C N G T F T W Q L Y G E E D V G F R F E E P F N W Q N D
pt016119_POPTR_    S S P S T D V D D K L F D L P D L F I D G V - N H S D G F C Y Y S P - - P W Q L C S - A D T G F R L E E P F L W E Y -
gm000882_Glyma0    S S H S T A D E E T L F D L P D L F P D G - - - - N S G L F S Y S S - - C W H L C A - V D S G F R L E E Q F L W E N F
 
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