fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G60490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016119 not found in 269aa AT2G44940.1 1st_not 0.456919060 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G60490.1     MGKQINIESSATHHQDN-IVSVITATISSSSVVTSSSDSWSTS-----------------
pt016119_POPTR_ MEKHIILEIDA---QDNSLTSSSTSTTTTTTTTSSSSSSFSTTISYTDRISKKEENSIAD
                * *:* :* .*   *** :.*  *:* ::::..:***.*:**:                 

AT3G60490.1     -----KRSLVQDNDSGGKRRKSNVSDDN-KNPTSYRGVRMRSWGKWVSEIREPRKKSRIW
pt016119_POPTR_ PKGSRKSQELQSGNEGNKKRKTTRNENNGKHPT-YRGVRMRSWGKWVCEIREPRKKSRIW
                     * . :*..:.*.*:**:. .::* *:** *************.************

AT3G60490.1     LGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEAT-
pt016119_POPTR_ LGTYPTAEMAARAHDVAALAIKGGSAYLNFPELVDELPRPLSKSPKDIQAAAAKAAAASF
                ***********************.*.:****** . ****:* *********:*** *: 

AT3G60490.1     --TWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLPD
pt016119_POPTR_ PETRHCEAEAEAEAD-MSHAEL----NVSNLSDNLAMDNIQESSSSPSTDVDDKLFDLPD
                  * *  .  :  ** :**:**    : *. *. :  .: .*:**: . . ::.:*****

AT3G60490.1     LFTDGLMNPNDAFCLCNGTFTWQLYGEEDVGFRFEEPFNWQND
pt016119_POPTR_ LFIDGV-NHSDGFCYYSP--PWQLC-SADTGFRLEEPFLWEY-
                ** **: * .*.**  .   .***  . *.***:**** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G60490.1     M G K Q I N I E S S A T H H Q D N - I V S V I T A T I S S S S V V T S S S D S W S T S - - - - - - - - - - - - - - - - -
pt016119_POPTR_    M E K H I I L E I D A - - - Q D N S L T S S S T S T T T T T T T T S S S S S S F S T T I S Y T D R I S K K E E N S I A D
 
AT3G60490.1     - - - - - K R S L V Q D N D S G G K R R K S N V S D D N - K N P T S Y R G V R M R S W G K W V S E I R E P R K K S R I W
pt016119_POPTR_    P K G S R K S Q E L Q S G N E G N K K R K T T R N E N N G K H P T - Y R G V R M R S W G K W V C E I R E P R K K S R I W
 
AT3G60490.1     L G T Y P T A E M A A R A H D V A A L A I K G N S G F L N F P E L S G L L P R P V S C S P K D I Q A A A T K A A E A T -
pt016119_POPTR_    L G T Y P T A E M A A R A H D V A A L A I K G G S A Y L N F P E L V D E L P R P L S K S P K D I Q A A A A K A A A A S F
 
AT3G60490.1     - - T W H K P V I D K K L A D E L S H S E L L S T A Q S S T S S S F V F S S D T S E T S S T D K E S N E E T V F D L P D
pt016119_POPTR_    P E T R H C E A E A E A E A D - M S H A E L - - - - N V S N L S D N L A M D N I Q E S S S S P S T D V D D K L F D L P D
 
AT3G60490.1     L F T D G L M N P N D A F C L C N G T F T W Q L Y G E E D V G F R F E E P F N W Q N D
pt016119_POPTR_    L F I D G V - N H S D G F C Y Y S P - - P W Q L C - S A D T G F R L E E P F L W E Y -
 
0